SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for XP_519156.1.37143 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  XP_519156.1.37143
Domain Number 1 Region: 16-203
Classification Level Classification E-value
Superfamily Rhomboid-like 1.96e-21
Family Rhomboid-like 0.004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_519156.1.37143
Sequence length 364
Comment PREDICTED: rhomboid domain-containing protein 2 isoform X1 [Pan troglodytes]; AA=GCF_000001515.7; RF=representative genome; TAX=9598; STAX=9598; NAME=Pan troglodytes; AL=Chromosome; RT=Major
Sequence
MAASGPGCRSWCLCPEVPSATFFTALLSLLVSGPRLFLLQQPLAPSGLTLKSEALRNWQV
YRLVTYIFVYENPISLLCGAIIIWRFAGNFERTVGTVRHCFFTVIFAIFSAIIFLSFEAV
SSLSKLGEVEDARGFTPVAFAMLGVTTVRSRMRRALVFGMVVPSVLVPWLLLGASWLIPQ
TSFLSNVCGLSIGLAYGLTYCYSIDLSERVALKLDQTFPFSLMRRISVFKYVSGSSAERR
AAQSRKLNPVPGSYPTQSCHPHLSPSHPVSQTQHASGQKLASWPSCTPGHMPTLPPYQPA
SGLCYVQNHFGPNPTSSSVYPASAGTSLGIQPPTPVNSPGTVYSGALGTPGAAGSKESSR
VPMP
Download sequence
Identical sequences H2QUS6 Q6NTF9
9598.ENSPTRP00000033031 9606.ENSP00000006777 gi|94818790|ref|NP_001035546.1| ENSPTRP00000033031 NP_001035546.1.87134 NP_001035546.1.92137 XP_003808971.1.60992 XP_519156.1.37143 ENSPTRP00000033031 ENSP00000006777 ENSP00000006777 ENSP00000458945 ENSP00000006777 ENSP00000458798

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]