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Domain assignment for XP_652847.1.49425 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_652847.1.49425
Domain Number 1 Region: 27-160
Classification Level Classification E-value
Superfamily Staphylococcal nuclease 3.01e-17
Family Staphylococcal nuclease 0.0083
Further Details:      
 
Domain Number 2 Region: 713-855
Classification Level Classification E-value
Superfamily Staphylococcal nuclease 0.00000000000131
Family Staphylococcal nuclease 0.0067
Further Details:      
 
Domain Number 3 Region: 182-321
Classification Level Classification E-value
Superfamily Staphylococcal nuclease 0.00000000000288
Family Staphylococcal nuclease 0.0067
Further Details:      
 
Weak hits

Sequence:  XP_652847.1.49425
Domain Number - Region: 494-598
Classification Level Classification E-value
Superfamily Staphylococcal nuclease 0.000183
Family Staphylococcal nuclease 0.02
Further Details:      
 
Domain Number - Region: 357-457
Classification Level Classification E-value
Superfamily Staphylococcal nuclease 0.000248
Family Staphylococcal nuclease 0.0083
Further Details:      
 
Domain Number - Region: 676-745
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 0.000361
Family Tudor domain 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) XP_652847.1.49425
Sequence length 861
Comment hypothetical protein [Entamoeba histolytica HM-1:IMSS]; AA=GCF_000208925.1; RF=representative genome; TAX=294381; STAX=5759; NAME=Entamoeba histolytica HM-1:IMSS; strain=HM-1:IMSS; AL=Scaffold; RT=Major
Sequence
MPAQNTQKKDLSKKVEKKPESEPKKEKKTFTAFVAKVKSNNSLTLSSKKDDKRSTVVLAY
VDLPRYDAKEKKEEAFAYETNEILRKKLVTGKEVKFEVVSEHQGIPKAVVPFVRKENIVC
TLIESGYASLKIKGKGKEFSQYFDAEQKAKDSHRGIFSEDMIKIAKKRPENIFFNEKEIS
ELKGKTIQGHIKRVEAPSHYIIEDTNRRRFKVVLYGVNQMLRYNTEKDVFDFDDDAKDAM
KYINRSFNQRDVTVKVIETSQRVAYAQLSVEKKDVAEELLRSGFVVCSKLENATEEIKQK
YQAAEKEAKKEKKARWTEFDQAAEDAIIAKRQQRLKELEDRRKNAKIISGAEIIYIGNHI
KAKKGNEEYNIHLASVRPVFKKNDKEFNDLVQFRIKECLRKLIVGKKFEAKECYKRSFTK
EDKTIEEVFYDVYASGKNVAVTLIKEGLVVLEKTRDEFYQSFDYKLLSETPKGEYKEKVV
TQYPAEKRESIKDVFLNNSFNCIVERVINVCKYVIYIPEKDCRMTVVLSHCRIPRDDENE
ELKKFNEESKAAVRALFGLNEVTVDFREFFKGNFCVDILSKKFDLCDLVLSKAYAQFSGR
DIPENIAEMKENQEGIYKFAGAKKEGESKPVRPVKVVKEVHREIKFGEGKNVYITGFDGS
MIYYYEKVADAKFIEELSNKLKKCNKGSVEQKDGQKCVVEIKGVQYRAIITKAVPTANVV
KCIDTGAVIVCGKNKLKPLKEEYENIEVTVKSIALAGVKTLVRGKDVDFDAMINAVSSFF
NKEATMFVATINDKEVAKVVVGDVCINNMLIEEGLSILDRFFNDNSDWGRAMTSAQSAAK
DKHLNVWRYGEIDDDEEKDKH
Download sequence
Identical sequences A0A175JM50 C4M0A8 M2RBS8 M3V060 N9TAH0
gi|56469738|gb|EAL47459.1| gi|67474196|ref|XP_652847.1| XP_652847.1.49425 jCVI|EHI_005150 294381.C4M0A8

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