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Domain assignment for XP_700683.4.45394 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  XP_700683.4.45394
Domain Number 1 Region: 377-559
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.54e-62
Family SPRY domain 0.0000324
Further Details:      
 
Domain Number 2 Region: 10-80
Classification Level Classification E-value
Superfamily RING/U-box 8.32e-20
Family RING finger domain, C3HC4 0.011
Further Details:      
 
Domain Number 3 Region: 161-227
Classification Level Classification E-value
Superfamily B-box zinc-binding domain 0.00000000000000214
Family B-box zinc-binding domain 0.00061
Further Details:      
 
Weak hits

Sequence:  XP_700683.4.45394
Domain Number - Region: 286-334
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 0.0392
Family HLH, helix-loop-helix DNA-binding domain 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) XP_700683.4.45394
Sequence length 568
Comment E3 ubiquitin-protein ligase TRIM58-like [Danio rerio]; AA=GCF_000002035.6; RF=reference genome; TAX=7955; STAX=7955; NAME=Danio rerio; AL=Chromosome; RT=Major
Sequence
MASPSSMLAEEQVHCSICLDVFTNPVSIPCGHNFCMACIGSYWKSSALFMCPMCKKTFFK
QPDISINTVLREIAEKFKEMKRNPIVSLQSATQPDPTPSPVELPIEMPELIPPNAPWAQE
VSCDVCTGPQRRAVKSCLVCLTSYCEEHLKTHTVRFTKHKLIEPVLNLEDRMCKKHERLL
ELFCKKDQTIVCVLCTEMEHRAHYTIPVEREWAEKKALLRKTESEVQQMIQDRLKKVDEI
KHSIELNKSGAQREVEDSMQVFSDLIRALQKAQAELVLDIEEKQRKTESRANEQIQELEQ
EITVLKTRNEELEYLSHTEDHIHFLQNFPSLMSHPHTKDWSEICVHADPCVGTIRRAVLK
LEETLTEEVEKLAEAELRRVQKYSVDVTFDPDTANPWLQLSEDGHQIRHLGSWQDLRDAP
ERFDTVVIALGRQGFCSGRRYWEVQVGEKDDWYLGVARGSVNRKGRISVSTTQGYWALAM
KKGQEYRVSSSPPLLVSVEHKLKRVGVYVDYEEGQVSFYDVQNKSHIYTFMDTFKEKLFP
FFYLYCCDKASDTMIICPVQETPHTKQC
Download sequence
Identical sequences E7EZC5
ENSDARP00000111607 XP_700683.4.45394 ENSDARP00000111607

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