SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for YP_002344976.1.54668 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  YP_002344976.1.54668
Domain Number 1 Region: 210-360
Classification Level Classification E-value
Superfamily IpsF-like 2.05e-85
Family IpsF-like 0.00000721
Further Details:      
 
Domain Number 2 Region: 4-202
Classification Level Classification E-value
Superfamily Nucleotide-diphospho-sugar transferases 1.61e-49
Family Cytidylytransferase 0.000000053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) YP_002344976.1.54668
Sequence length 371
Comment bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]; AA=GCF_000009085.1; RF=reference genome; TAX=192222; STAX=197; NAME=Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819; strain=NCTC 11168; AL=Complete Genome; RT=Major
Sequence
MSEMSLIMLAAGNSTRFNTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSSNITYM
KKFTKNYEFIEGGDTRAESLKKALELIDSEFVMVSDVARVLVSKNLFDRLIENLDKADCI
TPALKVADTTLFDNEALQREKIKLIQTPQISKTKLLKKALDQNLEFTDDSTAIAAMGGKI
WFVEGEENARKLTFKEDLKKLDLPTPSFEIFTGNGFDVHEFGENRPLLLAGVQIHPTMGL
KAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMKFKNANSMELLKQAYDKVREIGFEL
INIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEKLGFIGRKEGMAVLSS
VNLKYFDWTRL
Download sequence
Identical sequences A0A0B6V388 A0A0E1ZLD9 A0A1E7P1N7 Q9PM68
WP_002851397.1.100068 WP_002851397.1.100358 WP_002851397.1.100636 WP_002851397.1.100792 WP_002851397.1.100968 WP_002851397.1.101242 WP_002851397.1.101723 WP_002851397.1.101807 WP_002851397.1.101886 WP_002851397.1.10254 WP_002851397.1.10356 WP_002851397.1.10462 WP_002851397.1.10699 WP_002851397.1.11065 WP_002851397.1.11288 WP_002851397.1.11331 WP_002851397.1.11336 WP_002851397.1.11684 WP_002851397.1.1235 WP_002851397.1.12799 WP_002851397.1.13240 WP_002851397.1.13519 WP_002851397.1.13562 WP_002851397.1.14742 WP_002851397.1.14781 WP_002851397.1.154 WP_002851397.1.15561 WP_002851397.1.16820 WP_002851397.1.17095 WP_002851397.1.17171 WP_002851397.1.17462 WP_002851397.1.17486 WP_002851397.1.17852 WP_002851397.1.17970 WP_002851397.1.18051 WP_002851397.1.18219 WP_002851397.1.18221 WP_002851397.1.18253 WP_002851397.1.18954 WP_002851397.1.19078 WP_002851397.1.19191 WP_002851397.1.19381 WP_002851397.1.19580 WP_002851397.1.20077 WP_002851397.1.20292 WP_002851397.1.208 WP_002851397.1.21363 WP_002851397.1.21475 WP_002851397.1.21512 WP_002851397.1.21754 WP_002851397.1.21857 WP_002851397.1.22321 WP_002851397.1.23610 WP_002851397.1.2411 WP_002851397.1.24438 WP_002851397.1.24558 WP_002851397.1.24671 WP_002851397.1.24675 WP_002851397.1.24698 WP_002851397.1.24720 WP_002851397.1.24806 WP_002851397.1.25211 WP_002851397.1.25665 WP_002851397.1.26221 WP_002851397.1.26458 WP_002851397.1.26622 WP_002851397.1.27041 WP_002851397.1.27100 WP_002851397.1.27433 WP_002851397.1.27444 WP_002851397.1.27906 WP_002851397.1.2792 WP_002851397.1.2807 WP_002851397.1.28240 WP_002851397.1.30484 WP_002851397.1.3062 WP_002851397.1.31398 WP_002851397.1.31607 WP_002851397.1.31676 WP_002851397.1.31747 WP_002851397.1.31864 WP_002851397.1.32513 WP_002851397.1.33150 WP_002851397.1.33225 WP_002851397.1.33317 WP_002851397.1.33739 WP_002851397.1.33997 WP_002851397.1.34433 WP_002851397.1.34488 WP_002851397.1.34552 WP_002851397.1.35226 WP_002851397.1.35241 WP_002851397.1.35293 WP_002851397.1.35952 WP_002851397.1.35997 WP_002851397.1.36032 WP_002851397.1.37082 WP_002851397.1.37418 WP_002851397.1.37639 WP_002851397.1.37646 WP_002851397.1.37823 WP_002851397.1.3900 WP_002851397.1.39194 WP_002851397.1.39743 WP_002851397.1.39750 WP_002851397.1.39893 WP_002851397.1.41150 WP_002851397.1.41380 WP_002851397.1.41421 WP_002851397.1.41766 WP_002851397.1.41840 WP_002851397.1.42609 WP_002851397.1.43183 WP_002851397.1.43217 WP_002851397.1.43574 WP_002851397.1.43760 WP_002851397.1.4421 WP_002851397.1.44221 WP_002851397.1.44298 WP_002851397.1.44383 WP_002851397.1.45151 WP_002851397.1.45391 WP_002851397.1.45438 WP_002851397.1.46176 WP_002851397.1.46943 WP_002851397.1.46988 WP_002851397.1.47446 WP_002851397.1.48021 WP_002851397.1.48314 WP_002851397.1.485 WP_002851397.1.48597 WP_002851397.1.48803 WP_002851397.1.49316 WP_002851397.1.50213 WP_002851397.1.50385 WP_002851397.1.50392 WP_002851397.1.50763 WP_002851397.1.5097 WP_002851397.1.51415 WP_002851397.1.51618 WP_002851397.1.52711 WP_002851397.1.52732 WP_002851397.1.53003 WP_002851397.1.53289 WP_002851397.1.53793 WP_002851397.1.53913 WP_002851397.1.53979 WP_002851397.1.54592 WP_002851397.1.55240 WP_002851397.1.55476 WP_002851397.1.55661 WP_002851397.1.55875 WP_002851397.1.56397 WP_002851397.1.56688 WP_002851397.1.56922 WP_002851397.1.57227 WP_002851397.1.5737 WP_002851397.1.57741 WP_002851397.1.57958 WP_002851397.1.5843 WP_002851397.1.58505 WP_002851397.1.58546 WP_002851397.1.58576 WP_002851397.1.5866 WP_002851397.1.5888 WP_002851397.1.59093 WP_002851397.1.59195 WP_002851397.1.59516 WP_002851397.1.59550 WP_002851397.1.59555 WP_002851397.1.59795 WP_002851397.1.60240 WP_002851397.1.60397 WP_002851397.1.60531 WP_002851397.1.61064 WP_002851397.1.61249 WP_002851397.1.61283 WP_002851397.1.61383 WP_002851397.1.61465 WP_002851397.1.6187 WP_002851397.1.62153 WP_002851397.1.62305 WP_002851397.1.62423 WP_002851397.1.62439 WP_002851397.1.62451 WP_002851397.1.62457 WP_002851397.1.6254 WP_002851397.1.62545 WP_002851397.1.62623 WP_002851397.1.62672 WP_002851397.1.63100 WP_002851397.1.63528 WP_002851397.1.63837 WP_002851397.1.6402 WP_002851397.1.64025 WP_002851397.1.65060 WP_002851397.1.6545 WP_002851397.1.65500 WP_002851397.1.65644 WP_002851397.1.65735 WP_002851397.1.65824 WP_002851397.1.65927 WP_002851397.1.66520 WP_002851397.1.66802 WP_002851397.1.66841 WP_002851397.1.67069 WP_002851397.1.67138 WP_002851397.1.67216 WP_002851397.1.67511 WP_002851397.1.6862 WP_002851397.1.68625 WP_002851397.1.69031 WP_002851397.1.69516 WP_002851397.1.69737 WP_002851397.1.6976 WP_002851397.1.70749 WP_002851397.1.70788 WP_002851397.1.71045 WP_002851397.1.71370 WP_002851397.1.71472 WP_002851397.1.71478 WP_002851397.1.7176 WP_002851397.1.71884 WP_002851397.1.7207 WP_002851397.1.72159 WP_002851397.1.72239 WP_002851397.1.72519 WP_002851397.1.72607 WP_002851397.1.72627 WP_002851397.1.72925 WP_002851397.1.72941 WP_002851397.1.73090 WP_002851397.1.73097 WP_002851397.1.73138 WP_002851397.1.73406 WP_002851397.1.73534 WP_002851397.1.73649 WP_002851397.1.74140 WP_002851397.1.74360 WP_002851397.1.74472 WP_002851397.1.7481 WP_002851397.1.74864 WP_002851397.1.75460 WP_002851397.1.7643 WP_002851397.1.76559 WP_002851397.1.76586 WP_002851397.1.76904 WP_002851397.1.77068 WP_002851397.1.77207 WP_002851397.1.77380 WP_002851397.1.77828 WP_002851397.1.78159 WP_002851397.1.78406 WP_002851397.1.78684 WP_002851397.1.78999 WP_002851397.1.79231 WP_002851397.1.79449 WP_002851397.1.79613 WP_002851397.1.79874 WP_002851397.1.80807 WP_002851397.1.80825 WP_002851397.1.81578 WP_002851397.1.81664 WP_002851397.1.82311 WP_002851397.1.82383 WP_002851397.1.84246 WP_002851397.1.84261 WP_002851397.1.84803 WP_002851397.1.84835 WP_002851397.1.85419 WP_002851397.1.85725 WP_002851397.1.86579 WP_002851397.1.87295 WP_002851397.1.87669 WP_002851397.1.87927 WP_002851397.1.88134 WP_002851397.1.88403 WP_002851397.1.88784 WP_002851397.1.88833 WP_002851397.1.88889 WP_002851397.1.88999 WP_002851397.1.89384 WP_002851397.1.89485 WP_002851397.1.89661 WP_002851397.1.8994 WP_002851397.1.90075 WP_002851397.1.90277 WP_002851397.1.90347 WP_002851397.1.9044 WP_002851397.1.91047 WP_002851397.1.91326 WP_002851397.1.91330 WP_002851397.1.91661 WP_002851397.1.91753 WP_002851397.1.9176 WP_002851397.1.9231 WP_002851397.1.92449 WP_002851397.1.92465 WP_002851397.1.92680 WP_002851397.1.92983 WP_002851397.1.93029 WP_002851397.1.93057 WP_002851397.1.93549 WP_002851397.1.93575 WP_002851397.1.93632 WP_002851397.1.9372 WP_002851397.1.94534 WP_002851397.1.94535 WP_002851397.1.94631 WP_002851397.1.95087 WP_002851397.1.95360 WP_002851397.1.9591 WP_002851397.1.96265 WP_002851397.1.96291 WP_002851397.1.96302 WP_002851397.1.96501 WP_002851397.1.96525 WP_002851397.1.96616 WP_002851397.1.96886 WP_002851397.1.97120 WP_002851397.1.9776 WP_002851397.1.98476 WP_002851397.1.98885 WP_002851397.1.99003 WP_002851397.1.99042 WP_002851397.1.99129 WP_002851397.1.9920 WP_002851397.1.9929 WP_002851397.1.99440 WP_002851397.1.99444 WP_002851397.1.99612 WP_002851397.1.99811 YP_002344976.1.54668 1w55A gi|543948797|ref|YP_008541198.1| gi|543950575|ref|YP_008542919.1| IDP00326 1w55_A 1w57_A gi|543947009|ref|YP_008539514.1| gi|407942942|ref|YP_006858589.1| gi|218563196|ref|YP_002344976.1| 192222.Cj1607 gi|384448821|ref|YP_005656872.1| gi|403056318|ref|YP_006633723.1| gi|544063246|ref|YP_008562951.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]