SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSACAP00000001657 from Anolis carolinensis 76_2.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSACAP00000001657
Domain Number 1 Region: 61-141
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.33e-24
Family SCAN domain 0.00033
Further Details:      
 
Domain Number 2 Region: 892-948
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.89e-21
Family Classic zinc finger, C2H2 0.0082
Further Details:      
 
Domain Number 3 Region: 1228-1284
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.37e-20
Family Classic zinc finger, C2H2 0.0096
Further Details:      
 
Domain Number 4 Region: 1060-1116
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.05e-19
Family Classic zinc finger, C2H2 0.0096
Further Details:      
 
Domain Number 5 Region: 612-668
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.4e-19
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 6 Region: 387-444
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.48e-19
Family Classic zinc finger, C2H2 0.0096
Further Details:      
 
Domain Number 7 Region: 444-500
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.93e-19
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 8 Region: 1144-1200
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.53e-19
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 9 Region: 948-1004
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.06e-19
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 10 Region: 780-836
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.74e-19
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 11 Region: 724-780
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.04e-18
Family Classic zinc finger, C2H2 0.014
Further Details:      
 
Domain Number 12 Region: 667-724
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.81e-18
Family Classic zinc finger, C2H2 0.0077
Further Details:      
 
Domain Number 13 Region: 836-892
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.43e-18
Family Classic zinc finger, C2H2 0.009
Further Details:      
 
Domain Number 14 Region: 556-612
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.22e-18
Family Classic zinc finger, C2H2 0.0074
Further Details:      
 
Domain Number 15 Region: 500-556
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.25e-18
Family Classic zinc finger, C2H2 0.015
Further Details:      
 
Domain Number 16 Region: 1284-1340
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.28e-18
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 17 Region: 1004-1060
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.07e-17
Family Classic zinc finger, C2H2 0.0096
Further Details:      
 
Domain Number 18 Region: 214-259
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.18e-16
Family KRAB domain (Kruppel-associated box) 0.002
Further Details:      
 
Domain Number 19 Region: 345-397
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000258
Family Classic zinc finger, C2H2 0.017
Further Details:      
 
Domain Number 20 Region: 1190-1221
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000148
Family Classic zinc finger, C2H2 0.017
Further Details:      
 
Domain Number 21 Region: 1329-1368
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000186
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 
Domain Number 22 Region: 1106-1137
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000877
Family Classic zinc finger, C2H2 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSACAP00000001657   Gene: ENSACAG00000001767   Transcript: ENSACAT00000001696
Sequence length 1406
Comment pep:novel scaffold:AnoCar2.0:GL343713.1:141888:153746:-1 gene:ENSACAG00000001767 transcript:ENSACAT00000001696 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEKGRGSSVLMEPRVKMEEPNQTSPEGGREPNEMWGRRTVGSPGRMGQDALEEKAFRANL
QYQRFQGFRFQEALGPREVCSRLHSLCCLWLKPEEHTKAEMLDLVLLEQFLAVLPAEMER
WVRECGAETSSQAVALAEGFLLSQAEEEKVLQEERQEREDLQAQEAPLETSQGFLSRWIK
VEENTGESPLDEARVLGRCGSFPVSEAGEVASIRQDQVIFEDVAVHFSVEEWALLDPDQR
ALHWEVMEENYRMVSSLGGDAQGSENGEVQNKMWLKIARSKKEEERSVRIEAGEYKRKQC
PADTREITIQETIVESRKIGNSAVYENCFFQEASSIRPTHHEKYHIGDESYKCLECGIFF
SDKRSLIGHEMNHRGEKPYKCLQCGKSFCWKNKLKLHQNIHRGERPYKCLECGKCFSLKG
NLSKHQRTHMQEKPYKCLECGKGFSDKRNLIAHEMNHKGEKPYKCLECGKGFSDKRNLIA
HEMNHKGEKPYKCLECGKGFSDKRRLTGHEMKHRGENSYKCLECGKCFSWKGNLKIHKRT
HTKEKPYKCLECGKGFSYKRSFIVHEMNHKGEKPYKCLECGKGFSDKRNLIGHERKHRGE
NPYKCLECGKCFSLKGNLKIHKRTHTHEKPYKCLECGKGFSDKRNLIVHEMNHKGEKPYK
CLECGKAFSYKRNFIVHEMKHRGEKPYKCLECGKGFSDKRNLIGHERKHRGENPYKCLEC
GKCFSLKGNLKIHKRTHTHEKPYKCLECGKGFSDKRNFIVHEMKHRGEKPYKCLECGKGF
SDKRNFIVHEMKHRGEKPYKCLECGKGFSDKRNLIAHEMNHKGEKPYKCLECGKGFSDKR
SFIVHEINHKGEKPYKCLECGKAFSDKRNFIVHEMKHRGEKPYTCMECGKCFSQKGNLSR
HQRTHTQEKPYKCLECGKGFSDKRNLIVHEMNHKGEKPYKCLECGKGFSDKRRLTGHEMK
HRGENPYKCLECGKCFSWKGNLKIHKRTHTQEKPYKCLECGKGFSDKRSFIVHEMNHKGK
KPYKCLECGKGFSDKRSFIVHEKNHKGEKPYKCLECGKPFSDKRNFIVHEMKHRGEKPYK
CLECGKCFSWKGNLKIHKRTHTQEKPYKCLECGKGFYDKRSFIVHEMNHKGEKPHKCLEC
GKGFSDRRNLIGHEMKHRGENPYKCLECGKCFSLKGNLKIHKRTHTQEKPYKCLECGKGF
SYKRSFFVHEMNHKGEKPYKCLECGKGFSDKRNLIGHERKHRGEKPYKCLECGKCFSLKG
NLKVHKRTHTQEKPYKCLECGKGFSYKRSFIVHEMNHKGEKPYKCLECGKGFSDKRSLTG
HEMNHRGEKPYKCLECGKSYNRKSVLTAHWNSHTGKCGKSFSYKSDFKNVQNSPREDKTK
DMSGVREKLPLVNKFQDPLKTHMDEK
Download sequence
Identical sequences H9G5H1
ENSACAP00000001657

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]