SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSACAP00000020763 from Anolis carolinensis 76_2.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSACAP00000020763
Domain Number 1 Region: 44-124
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.83e-25
Family SCAN domain 0.00028
Further Details:      
 
Domain Number 2 Region: 457-514
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.97e-21
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 3 Region: 605-662
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.47e-20
Family Classic zinc finger, C2H2 0.0085
Further Details:      
 
Domain Number 4 Region: 717-774
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.95e-20
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 5 Region: 549-606
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.29e-20
Family Classic zinc finger, C2H2 0.007
Further Details:      
 
Domain Number 6 Region: 662-718
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.2e-19
Family Classic zinc finger, C2H2 0.0054
Further Details:      
 
Domain Number 7 Region: 401-458
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.05e-18
Family Classic zinc finger, C2H2 0.0087
Further Details:      
 
Domain Number 8 Region: 763-815
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.26e-18
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 9 Region: 345-402
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.31e-18
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 10 Region: 517-563
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000112
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 11 Region: 205-251
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.000000000000235
Family KRAB domain (Kruppel-associated box) 0.002
Further Details:      
 
Domain Number 12 Region: 308-359
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000937
Family Classic zinc finger, C2H2 0.0098
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSACAP00000020763   Gene: ENSACAG00000023526   Transcript: ENSACAT00000028594
Sequence length 831
Comment pep:novel scaffold:AnoCar2.0:GL344256.1:765:8545:1 gene:ENSACAG00000023526 transcript:ENSACAT00000028594 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEGQEPAAAQLEVFSVAIEAENNRAFWEDPWGKDQERSVLHSDLQRFRHFRYEEALGPRK
VCSRLHSLCRLWLKPERHSKAEMLDLVLLDQFLAFLPEEMERWVRECGAETSSQAVALAE
GFLLSQEEERKQEKPQRSIRKGTQVCSPWKRDVECHDCPLCIPQRLPRRDRVLKQNAMPK
RRQNSRIKITERWILLFLNCLFFLQVIFEDVSVDFSEEEWALLDPSQKALHQQIMEENLG
IVSSLEGTKQVPGGSYKQIEQANPSALSGFASPPLRLSSENSVSQASTHSEVKQINNSSQ
AMPIEETPFKYLEDGMDFNSKETLTFSQETHTRDKPFKCLECGKSFSQKISFVHHRAIHK
GEKLFKCSHCGKRFNQKRNLISHQATHTGVKPFKCLQCEKSFSLKGGLIRHHLTHTGEKP
FKCLQCEKSFGVKGGLISHQATHTGEKPFKCLQCETSFSLKRSLIRHQATHTGEKPFKCL
QCEKSFSQKGNLLSHQATHTGIKPFKCLQCEKSFSQKCEKSFSLKGSLISHQATHTGDKP
FKCVQCEKSFCQKGNLIAHQATHTGVKPFKCLHCEKSFSHKHILIRHQAIHTGEKPFKCS
VCEKSFSRNHLLISHQVTHTGEKPFKCLQCEKSFSQKGSLISHQATHTGEKPFKCLQCEK
CFRHKQDLIHHQATHTGEKPFKCLHCEKSFSHKQVLIRHQTIHTGEKPFKCLQCEKSFRH
KRNLISHQATHTGEKPFKCLQCEKVFSRKGKLLNHQATHTGEKPFKCLQCEKSFSEKRSL
IRHQATHTGEKPFKCSECGKSFSRKSYLVCHQATHGVVNPYERNGVKGSFF
Download sequence
Identical sequences H9GUK4
ENSACAP00000020763

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]