SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|17228217|ref|NP_484765.1| from Nostoc sp. PCC 7120

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  gi|17228217|ref|NP_484765.1|
Domain Number - Region: 105-300
Classification Level Classification E-value
Superfamily NHL repeat 0.000602
Family NHL repeat 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|17228217|ref|NP_484765.1|
Sequence length 306
Comment hypothetical protein alr0722 [Nostoc sp. PCC 7120]
Sequence
MKYIKSKLILKILILGSLLLIAQQVLAQSWRPVRGSILFGISGMALISQQNSSLDFLVVH
DNKQADQERLGVITIKGKNQPEYLSVSWQSNLELPIDLEALTSIPNTKDSFIALSSSGKA
YKFRLDSDKKTISVLKEFELPAIPPGSNFEGFALQNIEGKLVAMWAHRGEGEKPSTVYWG
VLDLNKYQITSRNFAKIKVPFPTGNVRHISDIKIDSGGIVYISAASDAGDNGPFQSAIYA
AGYLTLNNSSGQVIWRQSPQLIPLYRFNHHKIEGIELIPGADGGLIVGTDDENFGAYVYS
LGDNVL
Download sequence
Identical sequences A0A1Z4KRX3 Q8YYX0
gi|17228217|ref|NP_484765.1| WP_010994897.1.33676 103690.alr0722

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]