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Domain assignment for gi|17232603|ref|NP_489151.1| from Nostoc sp. PCC 7120

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|17232603|ref|NP_489151.1|
Domain Number 1 Region: 21-348
Classification Level Classification E-value
Superfamily Pectin lyase-like 4.71e-39
Family Filamentous hemagglutinin FhaB, secretion domain 0.018
Further Details:      
 
Domain Number 2 Region: 534-705
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.0000000471
Family iota-carrageenase 0.087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|17232603|ref|NP_489151.1|
Sequence length 962
Comment hypothetical protein all5111 [Nostoc sp. PCC 7120]
Sequence
MMKVSSVGLVLLNQLSLGFMLIWCHTAHAQVTSDGTTNTIVNPSGNNFHILDGIEKGNNL
FHSFSNFSVPTGGSATFDVTNTPNITTIFSRVTGGNISQIDGLIQTLGGNHQVSLFLMNP
NGIMFGQNAKLDIGGSFVGTTANSIKFTDGTEFSAINPISPPLLTMSVPIGLQMGSSASS
ITVQARPLQVDTGQSLVLLGGDIDLNGTGNARLLARDGQVILGSVASENFVPFSFSNARF
NFDFSGIPTFQTVQLRNGFTVDVNGSRGGNIQIHGQQVNITGNSQLMANSTGKTADGEGV
VVRASDALNIINSEIRVRLTADAQGRGGNITLAAPVMQITGNSNIATNLRGNETFGTLGL
DKGSNITITSQDFLLLGNATSRTGNGSARITTQGQGGVGRVGDIRITADRVRLLNNARVI
TDVTSTPVGGKAQAGDVVVNAGDVEISGSSSSQINSWISSTLERETSGWGGNIEINASRS
VRLSDSGTIRADSFGNGNASNITIRTPDLEIVGTNGLSRQSRISSSTAIFAAAPGFQAGD
IQIETQRLRLLDGGSLLVSSETKSSSGSINIKATESVEVIGAALDDRGGWRISGIDASSR
GEPLPNGDPGDISRINITTDTLRVLNSGAIKSSVTGDRIGGDISINAHTIEVGGRAVHSE
TMPTSQISSAASNPLTPGAGIAGNISLTTNRLFVRDGGLISVSGQDQAQAGNLQITAAQS
INLAQNSSLSAVSSVGDGGNINIDLNSSGLLYLRDMSQISTEAEGNGNGGNININHALFV
LGLENSDIVANAFQGRGGNINITTQGIIGLEFRNTLTPREDITNDITASSQFSVNGTVQI
NNVGIDPNSGVVELPTNVSDPSQQIANACDSNQGSSFIATGRGGIPQNPMQEVRSDRTWS
DTRDISAFQNTPQIQAQTPIQPQIPIQATSWHRNTQGKIELIADKSSVNLQPSLTCAAVN
KS
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Identical sequences Q8YM30
gi|17232603|ref|NP_489151.1| 103690.all5111

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