SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|77163933|ref|YP_342458.1| from Nitrosococcus oceani ATCC 19707

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|77163933|ref|YP_342458.1|
Domain Number 1 Region: 287-419
Classification Level Classification E-value
Superfamily TPR-like 5.31e-23
Family Tetratricopeptide repeat (TPR) 0.0041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|77163933|ref|YP_342458.1|
Sequence length 529
Comment peptidase M48, Ste24p [Nitrosococcus oceani ATCC 19707]
Sequence
MNKPRFSEIILGFYERRVSFALWLLAAALLSACAINPVTGERELSLVSETQEIQMGEENY
LTMRQMQGGDYTADPALTAYVSQVGQRLAAVSDRSLPYEFSVINDSTPNAWALPGGKIAL
NRGLLTELNNEAELAAVLGHEIVHAAAGHSAQGMERDLLLKGAVLGSVLATGVSEYTPLV
LGGAQAAAQLVNRKYSRDAEREADLYGMRYMSRAGYDPWAAVSLQETFVRLSEGQQENWL
SGLLASHPPSLERVEANEMTARTLPAGGELGAERYQAKLAPLRQVETAYAAYDQGRKALQ
EGNLEQALSLAERAITEEPREALFYGLRGDVYLARKRYQEALADYNRAIKRNDHFFYFYN
QRGLVNKALGHSEKARQDLQQSIALLPTESANKALGDLALTQGDRQGAMTYYQKAAASQT
PLGLEARRALVYLDLPNNPQKYLAAQVKLNRRGYLVVRVTNQAPLPVRDIGIEVRYLDSQ
GHVQSHKQAFQGILAAGQTARLKTNLGPLSDPRALERIEAKVIQARIAN
Download sequence
Identical sequences A0A0E2Z4P7 Q3JE18
gi|77163933|ref|YP_342458.1| WP_002813031.1.20919 WP_002813031.1.77844 WP_002813031.1.91979 323261.Noc_0402

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]