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Domain assignment for gi|77164039|ref|YP_342564.1| from Nitrosococcus oceani ATCC 19707

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|77164039|ref|YP_342564.1|
Domain Number 1 Region: 404-569
Classification Level Classification E-value
Superfamily TPR-like 2.09e-34
Family Tetratricopeptide repeat (TPR) 0.0036
Further Details:      
 
Domain Number 2 Region: 93-160,196-355
Classification Level Classification E-value
Superfamily TPR-like 2.09e-20
Family Tetratricopeptide repeat (TPR) 0.028
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) gi|77164039|ref|YP_342564.1|
Sequence length 581
Comment TPR repeat-containing protein [Nitrosococcus oceani ATCC 19707]
Sequence
MKQAPFRLTAGLVVLLLAGCATQEMRPAVAAKAEENTTGPATATAIPETRYPDVELTPAL
LYQLLSADIAGQRGQIGYAMEVYLQAAGETRDPRLAERATRIALFARDISAATQAARLWV
RADPSNGDARQALVSLLLGQQQYNEAENHLEHLVALSPESGERTFLKIATMLAGSADPET
ALALMGNLSAFQANDPDALYGYAYLALQLKQLDLALSTVERVIIQRPEADRPLIMRARIL
QQQGREEMALESLETVIENEEASIPLRLAYGQMLMEAGQVAKAERLFEQLEQAQPENPDV
LLAQGLLAMERLEYKPAEDYFQRLLKLGQNVDQARFYLGRLAELQSNAGKAIDWYASITG
GRLMVDAQVRQAVVTAQQGNLPAARQHLQLLSRKFPTQADRFQLAEGEILINAGRYEEAM
SHYDNALHSRPDDTNLLYARALVAENLGRLDIAEQDLQRVITLEPSNAEALNALGYTLAD
RTRRLEEALRYISRAMRLKPNNAFILDSMGWVHYRLGNYDKAEKYLREAMELRKDPEIAA
HLGEVLWAKGDREGARQVWQHTLKMNQGNKVLLEVMQRFQE
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Identical sequences A0A0E2Z4T4 Q3JDR2
gi|77164039|ref|YP_342564.1| WP_002813723.1.20919 WP_002813723.1.77844 WP_002813723.1.91979 323261.Noc_0511

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