SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Nemve1|245407|estExt_fgenesh1_pg.C_1580028 from Nematostella vectensis 1.0

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Nemve1|245407|estExt_fgenesh1_pg.C_1580028
Domain Number 1 Region: 214-455
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 2.22e-49
Family Voltage-gated potassium channels 0.00043
Further Details:      
 
Domain Number 2 Region: 92-183
Classification Level Classification E-value
Superfamily POZ domain 7.59e-19
Family Tetramerization domain of potassium channels 0.00015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Nemve1|245407|estExt_fgenesh1_pg.C_1580028
Sequence length 486
Sequence
MAIHATAGLAPFQTTDFSRRSSWTPRPGTPGESNCIHPSTPLLYDSPRRLSTAHAQCYHR
ASIPSVATLDISQGQGQGSLYDALFSSASEEDRIIIIVRGTKFETFRTTLDQFPETLLGS
PGGRGRFYDPTANALVFDRDPASFDAILFFYQSKGRVLARPGSVDEDTFSDEIKFYGLGD
DNMEDIAETVSHPELFQGHFAALRRLLWSMLENPGDSRTGKFLARFSMLIIILSVIAFCL
DTVPDFEFIDNKYDKDDTKDILERPQTPLWFAIDTAFVIFFTVEYLLRLFASPDRFKFIR
SFLAVVDFIAISPYYISLLLEEGTSNVKSFNVVRAIRLFRVVRLFKLYRYSNGLKLLGRA
LLQSKEKMGTLILCVLMAVVLFSSALFYIEGFGIAGSPFESIPASFWWAIITMSTVGYGD
IVPVTSLGKLVAAVCAFSGIILLYILPIPVFVSHFNKIYGKWKQRKRDVRNSVFVNLTLN
KRAAPW
Download sequence
Identical sequences A7SI06
jgi|Nemve1|245407|estExt_fgenesh1_pg.C_1580028 45351.JGI245407 XP_001628727.1.94760

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]