SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSORLP00000016644 from Oryzias latipes 69_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSORLP00000016644
Domain Number 1 Region: 518-575
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.89e-23
Family Classic zinc finger, C2H2 0.0085
Further Details:      
 
Domain Number 2 Region: 350-407
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.13e-23
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 
Domain Number 3 Region: 238-295
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.38e-23
Family Classic zinc finger, C2H2 0.0097
Further Details:      
 
Domain Number 4 Region: 462-519
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.29e-23
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 5 Region: 407-463
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.26e-23
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 6 Region: 630-687
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.6e-23
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 7 Region: 575-631
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.74e-23
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 
Domain Number 8 Region: 182-239
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.02e-22
Family Classic zinc finger, C2H2 0.0054
Further Details:      
 
Domain Number 9 Region: 294-351
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.87e-22
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 10 Region: 126-183
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.03e-21
Family Classic zinc finger, C2H2 0.0094
Further Details:      
 
Domain Number 11 Region: 676-728
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.44e-18
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 12 Region: 25-77
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6e-17
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 
Domain Number 13 Region: 93-140
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000223
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 14 Region: 1-36
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000761
Family Classic zinc finger, C2H2 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSORLP00000016644   Gene: ENSORLG00000013283   Transcript: ENSORLT00000016645
Sequence length 732
Comment pep:novel chromosome:MEDAKA1:12:24669402:24675188:1 gene:ENSORLG00000013283 transcript:ENSORLT00000016645 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CKKCGKKFSGRPQLKFHMKTHAGKKTFSCKNCEKSFSYKSNLKKHRTTHTGEKPFTCKEC
DSRFSQMSSLKTHMRMHTGKKDEDQIYLKQESKKCGKKFSRRPQLKFHMKTHAGKKTFSC
KNCEKSFSYKSNLKKHRTTHTGEKPFTCKECDSRFSQMSSLKTHMRMHTGKKPFTCKECK
KSFSQICDLKTHMRTHTGEKPFTCKECDTSFSRISHLKVHMRTHTGEKPFSCKECKKSFS
QISNLNSHMRTHTGEKPFTCKECDTSFSEKSKLKIHMRTHTGEKPFSCKECKKSFSQISS
LNSHMRTHTGEKPFTCKECDTSFSRIFTLKTHMRTHTGEKPFSCEECDTSFSDSSNLKIH
MRTHTGEKPFSCQECKRSFSQISHLKAHMRTHTGEKPFSCQECKKYFGNTSHLKVHMRTH
TGEKPFTCKECDKSFSEKSNFKRHMRIHTGEKPFTCKECDTSFSRISFLKSHMRTHTGEK
PFSCKECDKGFSHRSSLKTHMRTHTGEKPFTCKECDTSFSDSSNLKIHMRTHTGEKPFSC
KECKRSFSQISHLKAHMRIHTGEKPFSCQECKKYFGNTSHLKVHMRTHTGEKPFTCKECD
KSFSEKSKLKRHMRTHTGEKPFTCKECDTSFSRISLLKSHMRTHTGEKPFSCKECDKGFS
HRSSLKTHMRTHTGEKPFTCKECEISFNQISNLKSHMRTHTGEKPFPCNKCDASFSRIPL
LKTHMKTHTGER
Download sequence
Identical sequences H2MDJ9
8090.ENSORLP00000016644 ENSORLP00000016644 ENSORLP00000016644

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]