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Domain assignment for ENSOCUP00000012667 from Oryctolagus cuniculus 69_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOCUP00000012667
Domain Number 1 Region: 42-130
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 4.12e-34
Family SCAN domain 0.0000932
Further Details:      
 
Domain Number 2 Region: 786-842
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.11e-22
Family Classic zinc finger, C2H2 0.0074
Further Details:      
 
Domain Number 3 Region: 842-898
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.25e-22
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 4 Region: 883-935
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.39e-16
Family Classic zinc finger, C2H2 0.0069
Further Details:      
 
Domain Number 5 Region: 738-786
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000262
Family Classic zinc finger, C2H2 0.014
Further Details:      
 
Weak hits

Sequence:  ENSOCUP00000012667
Domain Number - Region: 235-286
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00471
Family KRAB domain (Kruppel-associated box) 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000012667   Gene: ENSOCUG00000014735   Transcript: ENSOCUT00000014731
Sequence length 968
Comment pep:novel chromosome:oryCun2:6:15727354:15744897:-1 gene:ENSOCUG00000014735 transcript:ENSOCUT00000014731 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAAALNSHIDASLEVDGCVIMKVEKAPEWASEPVLEESGSSESETFRKCFRQFCYEDVTG
PHEAFSKLWELCCRWLKPETRSKEQMLELLVIEQFLTILPEQIQAWAQRQCPESGEEAVA
LVVHLEKETGRLRQQVNSPVHSEKQAPLGDAWEVTEFQPERVTNQHRVVSREDAGNLRSE
RQEQLSQKREQQLLARTARPSAWVAVAADEWSIVDQEVTATRLAAAPQEPVKGVHVTRGF
PYKKSLHQIPAHRDLCRDIRRESGRNVVSLGSSVSTSNKTARLEQRKEPWTVGLPSSNKR
NILRSNYMKEKSVHTVQIPARNAGKTWREQQQWGLEDEKIAGVHWSYEETKTFLAILKES
RFYETLQACPRNSQVYGAVAEWLRECGFLRTPEQCRTKFKSLQKSYRKVRNGHMLEPCAF
FEDMDALLNPAAHASSTDKPKEIISLPRLKRISIGAKEHISVVEQEEAAEESEGDEMGVE
FIRKSEIRGAPVLFQNLSGVHWGYEETKTFLDILRETRFYEALQACHRKSKLYGAVAEQL
RECGFLRTPEQCRTKFKSLQKSYRKVKNGHVLESCAFYKEMDALINSRASAPSTSPPEEI
LLPSRQERGVIEIEPQEPTGWEPEETSQEAVIEDSGSERMSEEEILEEPEFQGPPVRLQS
PNDFEIGSSTREDPTQIIYKDIEQHRALIEKSKRVVSPNADPSKCRKRECISGRQWENLQ
GIRQGKPMSQPRDLGKAVVHQRPFMGKRPYRLLKYGESFGRSARLMCRMTHLKENPYKCS
VCGKCFGRSRSLIRHQRIHTGEKPFKCLDCGKSFNDSSNFGAHQRIHTGEKPYRCGECGK
CFSQSSSLIIHQRTHTGEKPYQCGECGKSFTNSSHFSAHRRVHTGENPYKCVDCEKSFNN
CTRFREHRRMHTGEKPYGCAQCGKRFSKSSVLTKHREVHVKEKLLSYPPCVYSPENPLKG
KTDEFRKT
Download sequence
Identical sequences ENSOCUP00000012667 9986.ENSOCUP00000012667

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