SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOCUP00000022610 from Oryctolagus cuniculus 69_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOCUP00000022610
Domain Number 1 Region: 408-495
Classification Level Classification E-value
Superfamily DEATH domain 0.0000000000000673
Family DEATH domain, DD 0.0072
Further Details:      
 
Domain Number 2 Region: 106-165
Classification Level Classification E-value
Superfamily TNF receptor-like 0.000000000137
Family TNF receptor-like 0.013
Further Details:      
 
Domain Number 3 Region: 64-107
Classification Level Classification E-value
Superfamily TNF receptor-like 0.000000000383
Family TNF receptor-like 0.0018
Further Details:      
 
Weak hits

Sequence:  ENSOCUP00000022610
Domain Number - Region: 594-650
Classification Level Classification E-value
Superfamily DEATH domain 0.011
Family Caspase recruitment domain, CARD 0.048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000022610   Gene: ENSOCUG00000016539   Transcript: ENSOCUT00000021228
Sequence length 655
Comment pep:novel chromosome:oryCun2:12:36575089:36621763:-1 gene:ENSOCUG00000016539 transcript:ENSOCUT00000021228 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGTSASNSTTLAPCSRVAGRTRATMIAGSFLLLGFLSTTTAQPEQKAPNLIGTYRHVDRA
TGQVLTCDKCPAGTYVSEHCTNTSLRVCSSCPAGTFTRHENGIERCHDCSQPCPWPMVEK
LPCAALTDRECTCPPGMFQSNGTCAPHTVCPVGWGVRKKGTETEDVRCKQCARGTFSDVP
SSVLKCKAYTDCLSQNLVVIKPGTKETDNVCGVHLSFSSTTSPSPGTAIFTSTEHMESHE
VPSSTYAPKGMNSTESNTSASVRPKVPSGIQEGTVPDNTSSASGEEGMNKTLPVLQVADH
QQGPHHRHILKLLPSMEATAGEKSSTPIKSPKRGHPRQNLHKHFDINEHLPWMIVLFLLL
VLVVIVVCSIRKSSRTLKKGPRQDPSTIVEKAGLKKSATPTQNREKWIYYCNGHGIDILK
LVAAQVGSQWKDIYQFLCNASEREVAAFSNGYTADHERAYAALQHWTIRGPEASLAQLIS
ALRQHRRNDVVEKIRGLMEDTTQLETDKLALPMSPSPLSPSPIPSPNTKLENSTLLMVEP
SPLDKNKGFFVDESEPLLRCDSTSSGSSALSRTGSFITKEKKDTVLRQVRLDPCDLQPIF
DDMLHILNPEELRVIEEIPQAEDKLDRLFEIIGVKSQEASQTLLDSVYSHLPDLL
Download sequence
Identical sequences G1TBU6
ENSOCUP00000014212 9986.ENSOCUP00000014212 ENSOCUP00000022610 XP_002714519.1.1745

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]