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Domain assignment for ENSOCUP00000024578 from Oryctolagus cuniculus 69_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOCUP00000024578
Domain Number 1 Region: 39-131
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.24e-38
Family SCAN domain 0.0000505
Further Details:      
 
Domain Number 2 Region: 488-544
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.52e-23
Family Classic zinc finger, C2H2 0.009
Further Details:      
 
Domain Number 3 Region: 589-641
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.14e-19
Family Classic zinc finger, C2H2 0.0032
Further Details:      
 
Domain Number 4 Region: 393-445
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.46e-17
Family Classic zinc finger, C2H2 0.0036
Further Details:      
 
Domain Number 5 Region: 544-600
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000588
Family Classic zinc finger, C2H2 0.0094
Further Details:      
 
Domain Number 6 Region: 230-274
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00000000000157
Family KRAB domain (Kruppel-associated box) 0.0035
Further Details:      
 
Domain Number 7 Region: 431-488
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000286
Family Classic zinc finger, C2H2 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000024578   Gene: ENSOCUG00000014264   Transcript: ENSOCUT00000030431
Sequence length 646
Comment pep:novel chromosome:oryCun2:1:94361081:94366982:1 gene:ENSOCUG00000014264 transcript:ENSOCUT00000030431 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MATALEPEDQGLWEEEGIFTVKLEDDFPCRPESVLQRDDPVLETSHQNFRRFRYQEAASP
REALIRLRELCHQWLRPERRTKEQILELLVLEQFLTVLPGELQSWVRGQRPESGEEAVTL
VEGLQKQPRRPRRWVTVHVHGQEVLSEETVHPGTEAGSPSELQDPAQTSTPEQSQEETTP
SPDLEAVEEQSPCREEELQPPETEVPVPQDPELPAERSSRDPEMVALLTALSQGRVTFKD
VAVCFSQDQWSDLDPTQKEFYGEYVLEEDCGIVVSLCKKFQVFRKHSREEEPQVLDVPEP
PQEPDEPEILSFIYTGDRSEDEEEYFEQEDLSLEDMHRSILEDPEIHQTPDWEVVFDNSP
GRLNERRFGTNISPVNSFINLPEAMAIHPLLGRHHDCPVCGKSFTCNSHLVRHLRTHTGE
KPYKCMECGKSYTRSSHLARHQKVHKMSTPYKYPLNRKTLDEAPPLIQAERTPPVEKPYR
CNDCGKHFRWTSDLVRHQRTHTGEKPFFCTICGKSFSQKSVLTTHQRIHLGGKPYLCGEC
GEDFSDHRRYLAHRKTHAAEELYLCSECGRCFNHSAAFAKHLRGHAAVRPCRCNECGKSF
SRRDHLVRHQRTHTGEKPFTCPTCGKSFSRGYHLIRHQRTHSEKTS
Download sequence
Identical sequences 9986.ENSOCUP00000012261 ENSOCUP00000024578

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