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Domain assignment for ENSOCUP00000001716 from Oryctolagus cuniculus 69_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOCUP00000001716
Domain Number 1 Region: 108-169,425-582
Classification Level Classification E-value
Superfamily Pectin lyase-like 1.15e-24
Family Pectate lyase-like 0.052
Further Details:      
 
Domain Number 2 Region: 724-890
Classification Level Classification E-value
Superfamily Pectin lyase-like 3.32e-17
Family Galacturonase 0.069
Further Details:      
 
Domain Number 3 Region: 6-79
Classification Level Classification E-value
Superfamily F-box domain 3.92e-16
Family F-box domain 0.0035
Further Details:      
 
Domain Number 4 Region: 539-673
Classification Level Classification E-value
Superfamily Pectin lyase-like 7.54e-16
Family Galacturonase 0.063
Further Details:      
 
Weak hits

Sequence:  ENSOCUP00000001716
Domain Number - Region: 119-260
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.000164
Family Pectin methylesterase 0.088
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000001716   Gene: ENSOCUG00000001992   Transcript: ENSOCUT00000001989
Sequence length 952
Comment pep:novel chromosome:oryCun2:1:16519429:16543848:1 gene:ENSOCUG00000001992 transcript:ENSOCUT00000001989 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEAGGLPLELWRMILAYLHLPDLGRCSLVCRAWYELILSLDSTRWRQLCLGCTECRHPNW
PNQPDVEPESWREAFKQHYLASKTWTKNALDLESSVCFSLFRRRKERRTLSVGPGREFDS
LGSALAMASLYDRIVLFPGVYEEQGEIILKVPVEIVGRGKLGEVALLASIDQHCSTTRLC
NLVFMPAWFSPIMYKTTSGHVQFDNCNFENGHIQVHGPGTCQVKFCIFKNTHVFLHNVPL
CVLENCEFVGSENNSVTVEGHPSADKNWAYKYLLGLIKSSPSLLPTEDSDFLMSVDLESR
DQAWSPKTCDIVIEGSQSPPSPASSSSKAGSQETEGGSDGERVAQTPDSSDGGLSPSGED
EDEDQLTYRLSYQVQGPRPVLGGSFLGPPLPGASIQLPSCLVLNSLQQELQKDKEAMALA
SSVQGCLIRKCLFRDGKGGVFVCSYGRAKMEGNVFRNLTYAVRCIHNSKIVMLRNHIHRC
RASGIFLRLEGGGLIAGNNIYHNGEAGVDIRKKSNPLILCNQIHHGLRSGIVVLGNGKGV
IRNNQIFSNKEAGIYILYHGNPIVSGNHIFKGRAAGIAVNENGKGLITENVIRENQWGGV
DIRRGGVPVLRSNLICFGYSDGVVVGDEGKGLIEGNTIYANKGCGVWMMSSSLPHVTSNH
VSYNGLYGVAVFSQKDGASEFPGGHGAQENFSEDGDAILWEPELEKDDDPLRRPVTVALV
ESNSVNHNGASGLYVQSSEALHVTANVIHANGDRGITVAQSSQLTRVANNSISCNRQSGV
KVEAQCKVELRGNGIYDNRGHGVITKGDSTVVIENDIIGNRGSGLQLLPRSDTKVIKNRI
HSFRAYGIAVRGRAKALVQDNIIFQGKTSKTIFQQIANNRDCVMQNNKFLVFRKKSDTWR
LVNPPARPHLENPLRGPSAGHSGQKVTAMGTRITARVEGGYHSNRSIFCTIL
Download sequence
Identical sequences 9986.ENSOCUP00000001716 ENSOCUP00000001716 XP_017206199.1.1745

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