SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOCUP00000004548 from Oryctolagus cuniculus 69_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOCUP00000004548
Domain Number 1 Region: 979-1189
Classification Level Classification E-value
Superfamily SET domain 3.4e-65
Family Histone lysine methyltransferases 0.0013
Further Details:      
 
Domain Number 2 Region: 870-970
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 1.08e-25
Family PWWP domain 0.0000201
Further Details:      
 
Domain Number 3 Region: 219-348
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 3.67e-24
Family PWWP domain 0.006
Further Details:      
 
Domain Number 4 Region: 816-882
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000000000000162
Family PHD domain 0.0041
Further Details:      
 
Domain Number 5 Region: 1209-1280
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000000000137
Family PHD domain 0.0055
Further Details:      
 
Domain Number 6 Region: 657-706
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00000000266
Family PHD domain 0.0075
Further Details:      
 
Domain Number 7 Region: 435-494
Classification Level Classification E-value
Superfamily HMG-box 0.0000000055
Family HMG-box 0.0035
Further Details:      
 
Weak hits

Sequence:  ENSOCUP00000004548
Domain Number - Region: 710-762
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0162
Family PHD domain 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000004548   Gene: ENSOCUG00000005245   Transcript: ENSOCUT00000005247
Sequence length 1349
Comment pep:novel scaffold:oryCun2:GL018796:3865:74299:1 gene:ENSOCUG00000005245 transcript:ENSOCUT00000005247 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEFSIKKSPLSVQKVVKCIKMKQAPEILGGANGKTQNCEVNRDCSVFLSKAQLSSSIQEG
VMQKFNGRDALPFIPAEKLKDLTSRVFNGEPGAHDAKLRFESQEMKGIGTPPNTTPIKNG
SPEIKLKITKTYMNGKPLFESSICGDGAADVSQPEENGQKSENTARRSRKRSIKYDSLLE
QGLVEAALVSKSSSPSDKKVPVKKEPCTSTGRDKDHLLKYNVGDLVWSKVSGYPWWPCMV
SADPLLHNYTKLKVKPGQKKSARQYHVQFFGDAPERAWIFEKSLVAFQGEEQFEKLCQES
ARQAPTKAEKIKLLKPISGKLRAQQMGIVQAEEAAGMSVEERKAKFTFVYVGDQLHLNPR
VAEEVVAVVCPGETAASSGVREEAAGSPLCEREEGVPTKRRRRAKLCVSAENRESDPGSV
KTVETDPKRGVGSPAGRKKASASAPRGRKGDAASQFLVFCQKHRDEVVAEHPDASGEEIE
ELLGSQWDMLNEKQARYNTKFALVTSAPCEDDSGTLNGKKRNHTKRTPDPPEEADVEDAP
RKRLRTDKPGLRKRDVLTDKTTRTSSYKATETTSLLKSQAATKNLSDACKPLKKRNRASA
AASSALGFSKSSSPSASLTENEVSDSPGDEPSESPYESADETQTEVSVSSKKSERGVAAK
KEYVCQLCEKTGSLLLCEGPCCGAFHLACLGLSRRPEGRFTCSECASGVHSCFVCKESKT
DVKRCVVTQCGKFYHEACVRKYPLTVFESRGFRCPLHSCVSCHASNPSGPRPSKGKMMRC
VRCPVAYHGGDACLAAGCAVIASHSIICTGHFTARKGKRHHAHVNVSWCFVCSKGGSLLC
CESCPAAFHPDCLNIDMPDGSWFCNDCRAGKRLHFQDIIWVKLGNYRWWPAEVCHPKNVP
PNIQKMKHEIGEFPVFFFGSKDYYWTHQARVFPYMEGDRGSRYQGVRGIGRVFKNALQEA
EARFREVKLQREARETQESERKPPPYKHIKVNKPYGKVQIYTADISEIPKCNCKPTDENP
CGLDSECLNRMLMFECHPQVCPAGEHCQNQCFTKRQYPETKIIKTDGKGWGLVAKRDIRK
GEFVNEYVGELIDEEECMARIKHAHENDITHFYMLTIDKDRIIDAGPKGNYSRFMNHSCQ
PNCETLKWTVNGDTRVGLFAVCDIPAGGRSSPFNYNLDCLGNEKTVCRCGASNCSGFLGD
RPKTSVPLSADEKGKKAKKKSRRRRARGDGRRQSEDECFRCGDGGQLVLCDRKLCTKAYH
LSCLGLGKRPFGKWECPWHHCDVCGKPSTSFCHLCPNSFCKEHQDGAVFSSTQDGQAYCC
EHDSPFPEPAKCKGKRRRRRCWRRVTEGK
Download sequence
Identical sequences G1SNI3
ENSOCUP00000004548 ENSOCUP00000004548 9986.ENSOCUP00000004548

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]