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Domain assignment for ENSOCUP00000008697 from Oryctolagus cuniculus 69_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOCUP00000008697
Domain Number 1 Region: 36-123
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 2.24e-36
Family SCAN domain 0.0000536
Further Details:      
 
Domain Number 2 Region: 444-501
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.43e-22
Family Classic zinc finger, C2H2 0.0079
Further Details:      
 
Domain Number 3 Region: 486-538
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.72e-21
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 
Domain Number 4 Region: 408-458
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.89e-16
Family Classic zinc finger, C2H2 0.0098
Further Details:      
 
Domain Number 5 Region: 223-266
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.0000000209
Family KRAB domain (Kruppel-associated box) 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000008697   Gene: ENSOCUG00000010095   Transcript: ENSOCUT00000010094
Sequence length 549
Comment pep:novel chromosome:oryCun2:19:7679458:7696912:1 gene:ENSOCUG00000010095 transcript:ENSOCUT00000010094 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPIDLGQALGLLPSLTKAENSPFSGPDAAPEAELSSPEAARQLFRQFRYQVMSGPHETLR
QLRKLCFQWLQPEVHTKEQILEILMLEQFLTILPGEIQMWVRKQCPGSGEEAVTLVESLK
GDPQRLWQWISIQVLGQEILSEKMESPSCQAGEVEPHLEVGRQELGLQTSPSGPGELLGH
VVKEEADAEPALALAASHLPALPEERLIRDQDFGASLLPTAPQEQWRHLDSTQKEQYWDL
MLETYGKMVSGAGTSSSKPDLTNSAEYGEELAGLHLHVSEKIPRPACVAGRQENDKENLN
LENHRDQEPLAGSRQASGEAAPQASLRGMFGDEEPGRFGQRETLPEALESLQAEGAGGQL
SSQERNSGKQLGQHLPHPPPELSAMWLEEKREAFPKAQPRAPMAQKLPTCRECGKTFYRN
SQLVFHQRTHTGETYFQCPICKKAFLRSSDFVKHQRTHTGEKPCKCDYCGKGFSDFSGLR
HHEKIHTGEKPYKCPICEKSFIQRSNFNRHQRVHTGEKPYKCSHCGKSFSWSSSLDKHQR
SHLGKKPLQ
Download sequence
Identical sequences ENSOCUP00000008697 9986.ENSOCUP00000008697

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