SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOCUP00000012580 from Oryctolagus cuniculus 69_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOCUP00000012580
Domain Number 1 Region: 4-51
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 6.8e-18
Family KRAB domain (Kruppel-associated box) 0.0015
Further Details:      
 
Domain Number 2 Region: 152-187
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000118
Family Classic zinc finger, C2H2 0.0098
Further Details:      
 
Domain Number 3 Region: 191-242
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000137
Family Classic zinc finger, C2H2 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000012580   Gene: ENSOCUG00000014634   Transcript: ENSOCUT00000014632
Sequence length 256
Comment pep:novel scaffold:oryCun2:GL018881:260227:263336:1 gene:ENSOCUG00000014634 transcript:ENSOCUT00000014632 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRLVLQEAVTFQDVAVVFTKEELRLLDAAQRALYRAVMLENFRNLLSVGGKNLNEMEVGL
RHLPREEVFRSQTWQQFTVELAGCQDFLAGIQRTGTELKNQRDTLDKDGEFSEGWNQSSQ
LHAQYRVHAGEKPPGGEDRAEGLSWHCRLPIRQRAHAGEKPYPCEKCGDAFRRHSSLQAH
QRAHSRERVSQRSQSRRQQRVPTGEKPATCGECGRNPGKLSSCQVPLTVHTGEKLHTCEA
CGVGRSQHSCLQGRRR
Download sequence
Identical sequences 9986.ENSOCUP00000012580 ENSOCUP00000012580

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]