SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOGAP00000016778 from Otolemur garnettii 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOGAP00000016778
Domain Number 1 Region: 241-309
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000335
Family Laminin-type module 0.06
Further Details:      
 
Domain Number 2 Region: 370-419
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000209
Family Laminin-type module 0.0074
Further Details:      
 
Domain Number 3 Region: 307-359
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000218
Family Laminin-type module 0.031
Further Details:      
 
Domain Number 4 Region: 422-469
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000307
Family Laminin-type module 0.0052
Further Details:      
 
Domain Number 5 Region: 472-507
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000248
Family Laminin-type module 0.032
Further Details:      
 
Domain Number 6 Region: 525-572
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000279
Family Laminin-type module 0.022
Further Details:      
 
Domain Number 7 Region: 958-1144
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 0.000034
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.019
Further Details:      
 
Weak hits

Sequence:  ENSOGAP00000016778
Domain Number - Region: 68-146
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.0085
Family N-terminal domain of xrcc1 0.065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOGAP00000016778   Gene: ENSOGAG00000032977   Transcript: ENSOGAT00000026439
Sequence length 1163
Comment pep:novel scaffold:OtoGar3:GL873697.1:184459:219067:-1 gene:ENSOGAG00000032977 transcript:ENSOGAT00000026439 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
ALPGLLCAQQACSRGACYPPAGDLLIGRTQFLRASSTCGLTKPETYCTHHGEWQMKCCRC
DSRLPHNYNSHRVENVVSSSGPMRWWQSQNDVNPVSLQLDLDRRFQLRDIMMEFKGPMPA
GMLIERSSDFGKTWQVYQYLAADCTSTFPRVRQGQPQTWQDARCQSLPQRPNGHLNGGKV
QLNLMNLASGIPATQSQKIQELGEITNLRVNFTRLAPMPQRGYHPPSAYYAVSQLRLQGS
CFCHGHADRCAPKPGASAGPSTAVQVHDVCVCQHNTAGPNCERCAPFYNNRPWRPAEAQD
PHVCQRCECNGHSETCHFDPAVFAASQGTHGGVCDNCRDHTEGRNCERCQLHYFRNRRPG
APIEETCIPCECDPDGAVPGAPCDPVTGKCVCKEHVQGERCDLCKPGFTGLTNANPQGCH
RCDCSLLGARQDMPCDEETGRCLCLPNVVGPKCDQCAPYHWKLASGQGCQPCACDPHNSL
SPQCNQFTGQCPCQEGFGGLTCNAAAIRQCPDRTHGDAATGCRACDCDFRGTEGPGCDKA
SGRCLCRPGLTGPRCDQCQRGYCNRYPVCVACHPCFQTYDADLREQALRLGNLRNATASL
WAGPGLEDHGLVSRMQDTKRKVEQIRAILSGASVTEQEVAQVANDISSIRRTLQGLQPDL
PLEEEILSLPGDLESLDRSFNHLLVMYQNKRQQFEKFSSADPSGAFRLLTTAYERSSQAA
QQVSDSSRLLRQLRDSRKEAERLEVQAGGGSAGGPQLAALRLEMASLPDLTPTINKLCGG
SRQTACTPGACPGELCPRDNGTACGSHCRGALPRAGGAFRTAGQVAEQLQGFDAQLQQTR
QMVGHGQSCSCSIPRHFQRAGARVWLRRAAAPWGTTARMSVDLHLMGGCLPDPDTSAATI
QEVSEAVLALWLPTDSATVLRKMNEIQAIAAKLPNVDLVLSQTKQDIARARRLQAEAEQA
RIRAHTVEGQVEDVIGNLRQGTVALQEAQDTMQGTSRSLQLIQDRVAEVQQVLGPAERLV
TGMMEQLGDFWARMGELRRQAQQQQAQAIQVQQLADRTSKHALSAQEGFERIKQKYAELK
DRLGQSPMLGEQGSRILSVKTEAEELFGETMEMMDRMKDMESELLRGSQAIMLRSADLTG
LEKRVEQIRDHINERVLYYATCK
Download sequence
Identical sequences H0XKY8
ENSOGAP00000016778 ENSOGAP00000016778

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]