SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSPPYP00000015619 from Pongo abelii 69_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSPPYP00000015619
Domain Number 1 Region: 50-139
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 5.04e-35
Family SCAN domain 0.00011
Further Details:      
 
Domain Number 2 Region: 228-289
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.44e-22
Family KRAB domain (Kruppel-associated box) 0.0013
Further Details:      
 
Domain Number 3 Region: 493-550
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.2e-20
Family Classic zinc finger, C2H2 0.0093
Further Details:      
 
Domain Number 4 Region: 761-812
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.18e-20
Family Classic zinc finger, C2H2 0.0055
Further Details:      
 
Domain Number 5 Region: 678-727
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3e-17
Family Classic zinc finger, C2H2 0.0073
Further Details:      
 
Domain Number 6 Region: 976-1028
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.1e-16
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 7 Region: 605-662
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.59e-16
Family Classic zinc finger, C2H2 0.019
Further Details:      
 
Domain Number 8 Region: 862-914
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000109
Family Classic zinc finger, C2H2 0.0088
Further Details:      
 
Domain Number 9 Region: 832-877
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000386
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number 10 Region: 535-587
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000126
Family Classic zinc finger, C2H2 0.023
Further Details:      
 
Domain Number 11 Region: 444-494
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000697
Family Classic zinc finger, C2H2 0.021
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSPPYP00000015619   Gene: ENSPPYG00000013962   Transcript: ENSPPYT00000016240
Sequence length 1031
Comment pep:known chromosome:PPYG2:3:102126196:102157613:1 gene:ENSPPYG00000013962 transcript:ENSPPYT00000016240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPPGRWHAVYPAQAQSSRERGRLQTVKKEEEDESYTPVQPARPQTLNRPGQELFRQLFRQ
LRYHESSGPLETLSRLRELCRWWLRPDVLSKSQILELLVLEQFLSILPGELRVWVQLHNP
ESGEEAVALLEELQRDLDGTSWRDPGPAQSPDVHWMGTGALRSAQIWSLASPLRSSSALG
DHLEPPYEIEARDFLAGQSDTPAAQMPALFQREGCPGDQVTPTRSLTAQLQETMTFKDVE
VTFSQDEWGWLDSAQRNLYRDVMLENYRNMASLVGPFTKPALISWLEAREPWGLNMQAAQ
PKGNPGAAPTGDDLQIKTNKFILNQEPLEETETLAVSSGCPATSVSEGIGLRESFQQKSR
QKDQCENPIQVRVKKEETNFSRRTGKDSEVSGSNSLDLKHVTYLRVSGRKESLKHGCGKH
FRMSSHHYDYKKYGKGLRHMIGGFSLHQRIHSGLKGNKKDVCGKDFSLSSHHQHGQSLHM
VGVSFKCSDCGRSFSHSSHLAYHQRLHTQEKAFKCRVCGKAFRWSSNCARHEKIHTGVKP
YKCDLCEKAFRRLSAYRLHRETHAKKKFLELNQYRAALTYSSGFDHHLGDQSGEKLFDCS
QCRKSFHCKSYVLEHQRIHTQEKPYKCTKCRKTFRWRSNFTRHMRLHEEEKFYKQDECRE
GFRQSPDCSQPQGAPAVEKTFLCQQCGKTFTRKKTLVDHQRIHTGEKPYQCSDCGKDFAY
RSAFIVHKKKHAMKRKPEGGPSFSQDTVFQVPQSSHSREEPYKCSQCGKAFRNHSFLLIH
QRVHTGEKPYKCRECGKAFRWSSNLYRHQRIHSLQKQYDCHESEKTPNVEPKILTGEKRF
WCQECGKTFTRKRTLLDHKGIHSGEKRYKCNLCGKSYDRNYRLVNHQRIHSTERPFKCQW
CGKEFIGRHTLSSHQRRHTRAAQAERSPPARSSSQDTKLRLQKLKPSEEMPLEDCKEACS
QSSRITGLQDISIGKKCHKCSICGKTFNKSSQLISHKRFHTRERPFKCSKCGKTFRWSSN
LARHMKNHIRD
Download sequence
Identical sequences H2PB09
XP_009237415.1.23681 ENSPPYP00000015619 9600.ENSPPYP00000015619 ENSPPYP00000015619

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]