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Domain assignment for ENSOGAP00000005887 from Otolemur garnettii 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOGAP00000005887
Domain Number 1 Region: 387-669
Classification Level Classification E-value
Superfamily WD40 repeat-like 1.1e-68
Family WD40-repeat 0.0000244
Further Details:      
 
Domain Number 2 Region: 246-339
Classification Level Classification E-value
Superfamily TRAF domain-like 0.00000000000602
Family SIAH, seven in absentia homolog 0.012
Further Details:      
 
Domain Number 3 Region: 128-188
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000000606
Family RING finger domain, C3HC4 0.022
Further Details:      
 
Domain Number 4 Region: 183-256
Classification Level Classification E-value
Superfamily TRAF domain-like 0.000000000157
Family SIAH, seven in absentia homolog 0.0051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOGAP00000005887   Gene: ENSOGAG00000006581   Transcript: ENSOGAT00000006587
Sequence length 670
Comment pep:known_by_projection scaffold:OtoGar3:GL873563.1:8411732:8423608:1 gene:ENSOGAG00000006581 transcript:ENSOGAT00000006587 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSSGKSARYNRFSGGPPNLPNPDIATGTRMETTFGAAFSAVTTITKADGTSTYKQHRRTP
SSSSTLAYSPRDEEDSMPPISTPRRSDSAISVRSLHSESSMSLRSTFSLPEEEEEPEPLV
FAEQPSVKLCCQLCCSVFRDPVITTCGHTFCRRCALKSEKCPVDNAKLTVVVNNIAVAEQ
IGELFIHCRHGCRVVSSGKPTVFEVDPRGCPFTIKLSARKDHEGSCDYRPVRCPNNPSCP
PLLKMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLETCRFEGLKEFLQQTDDRFHE
MHVALAQKDQEIAFLRSMLGKLSEKIDQLEKSLELKFDVLDENQSKLSEDLMEFRRDASM
LNDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTI
KVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDN
PVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQT
IKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVG
TVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGA
VDSTVKVWTC
Download sequence
Identical sequences H0WUH9
ENSOGAP00000005887 XP_012661281.1.62490 ENSOGAP00000005887

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