SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOGAP00000020845 from Otolemur garnettii 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOGAP00000020845
Domain Number 1 Region: 191-248
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.3e-21
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 2 Region: 235-295
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.03e-19
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 3 Region: 508-560
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.73e-17
Family Classic zinc finger, C2H2 0.0038
Further Details:      
 
Domain Number 4 Region: 463-519
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.88e-17
Family Classic zinc finger, C2H2 0.0096
Further Details:      
 
Domain Number 5 Region: 421-472
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000459
Family Classic zinc finger, C2H2 0.0066
Further Details:      
 
Domain Number 6 Region: 153-205
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000123
Family Classic zinc finger, C2H2 0.019
Further Details:      
 
Domain Number 7 Region: 286-317
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000104
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 8 Region: 346-384
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000497
Family Classic zinc finger, C2H2 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOGAP00000020845   Gene: ENSOGAG00000034209   Transcript: ENSOGAT00000024628
Sequence length 590
Comment pep:known_by_projection scaffold:OtoGar3:GL873572.1:8832364:8838366:1 gene:ENSOGAG00000034209 transcript:ENSOGAT00000024628 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MRETLEALSSLGFSVGQPEMSPQSEPREGSHNVQEQMGSSREENTLGTCSGHKAPRLEEG
EAPCRGSQMCMPQKAEPVGSCPGDEWMIRKVKVEDEDQEAEEEVEWPQHLSLLPSPFPAP
DLGHLAAAYKLEPGVPGALSGVALSGWAPIPEKPYGCGECERRFRDQLTLRLHQRLHRGE
GPCACPDCGRSFTQRAHMLLHQRSHRGERPFPCSECDKRFSKKAHLTRHLRTHTGERPYP
CAECGKRFSQKIHLGSHQKTHTGERPFPCTECEKRFRKKTHLIRHQRIHTGERPYQCGQC
ARSFTHKQHLVRHQRVHEAASQSRPSPDAPASPYSSAPSPTPSPPGPKPFSCSDCGLSFG
WKKNLATHQRLHRSEDRPFGCEQCALVASVDPSAAEPLACASGGPGCGTGTGPAAPQHTP
SGERCFFCPDCGRGFSHGQHLTRHRRVHTGERPFACAQCGRRFGSRPNLVAHSRAHSGAR
PFVCAQCGRRFSRKSHLGRHQAVHTGSRPHACTVCARSFSSKTNLVRHQAIHTGSRPFSC
PQCGKSFSRKTHLVRHQRVHGEAAHTTSDAALSTPAWPIPTQGAPPPLFF
Download sequence
Identical sequences H0XXK2
ENSOGAP00000020845 ENSOGAP00000020845

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]