SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOGAP00000021648 from Otolemur garnettii 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOGAP00000021648
Domain Number 1 Region: 77-212
Classification Level Classification E-value
Superfamily TRAF domain-like 3.92e-24
Family SIAH, seven in absentia homolog 0.0069
Further Details:      
 
Domain Number 2 Region: 245-344
Classification Level Classification E-value
Superfamily PDZ domain-like 4.07e-23
Family PDZ domain 0.0000253
Further Details:      
 
Domain Number 3 Region: 413-504
Classification Level Classification E-value
Superfamily PDZ domain-like 9.99e-22
Family PDZ domain 0.00000875
Further Details:      
 
Domain Number 4 Region: 10-81
Classification Level Classification E-value
Superfamily RING/U-box 8.73e-16
Family RING finger domain, C3HC4 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOGAP00000021648   Gene: ENSOGAG00000031641   Transcript: ENSOGAT00000033258
Sequence length 1062
Comment pep:known_by_projection scaffold:OtoGar3:GL873534.1:13436745:13671135:1 gene:ENSOGAG00000031641 transcript:ENSOGAT00000033258 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCANAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPNVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDAGTQT
DITFEHIMALAKMSSPSPPVLDPYLLPEEHSSAHEYYDPNDYIGDIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSNPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCTDADCLGIPVDECERFRELLELKCQVKSAA
PYGLYYPGGALDAGKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYRESWM
LHHSGFRNYNTSVDVRRRELSDITELPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLR
RVAEGGGEGALGTAEAYGPAPKNLLAIREDPEVGTPNYSPSAQELDPSQALESRERRGSD
GSRSPTPGPKLGSAYLPAFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVS
MCKDLTSSSPSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDAV
SEMKMGRYWSKEERKQHLVKAKEQRRRREFMLQSRLDCLKEQQAADDRKEMNILELSHKK
MMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
Download sequence
Identical sequences H0XZV5
ENSOGAP00000021648 ENSOGAP00000021648 XP_003785538.1.62490

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]