SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for OsIBCD005078 from Oryza sativa ssp. Indica

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OsIBCD005078
Domain Number 1 Region: 500-873
Classification Level Classification E-value
Superfamily L domain-like 4.76e-47
Family Ngr ectodomain-like 0.055
Further Details:      
 
Domain Number 2 Region: 152-428
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.14e-47
Family Extended AAA-ATPase domain 0.051
Further Details:      
 
Domain Number 3 Region: 923-1193
Classification Level Classification E-value
Superfamily RNI-like 7.69e-20
Family 28-residue LRR 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) OsIBCD005078
Sequence length 1210
Comment 1210
Sequence
MIAGAVVQRVAGMLGDNAWERIQLLWNFQEDVQDMKSKMTDLKVALSYADKHSRETDDDA
LVLRHWLNKYKSVAYDMEDTLDELLTNAMIWENNPGTVKLFFSSINPLIVRITMSIKMRN
IRMKLDKIAEDQKKFPSMQLANPTGQDSTDKWRETFIGHTDEIEMVGRAREKKEILIKVL
QNDGGQEISIIPVVGLGGMGKTTLAKAVYTDKETHMFDVKAWVHVSMEFQLNKIVSGIIS
HVEGSTPANIADLQYLKSQLDRILCNKLYLIILDDLWEEGWSKLEKLMEMLQSGKKGSKI
IVTTRSEKVVNTLSTIRLSYFHTVDPIKLVGMPIDECWFIMKPRNMENCEFSDLVDIGKE
IAQRCSGVPLVAKALGYVMQKHRTREEWMEIKNSNILDTKDDEEGILKGLLLSYYHMPPQ
LKLCFMYCSMFPMSHVIDHDCLIQQWIALGFIQDTDGQPLQKVAMEYVNELLGMSFLTIF
TSPTVLASRMLFKPTLKLHMHDMVHELARHVAGNEFSHTNGAENRNTKRDNLNFHYHLLL
NQNETSSAYKSLATKVRALHFRGCDKMHLPKQAFSHTLCLRVLDLGGRQVSELPSSVYKL
KLLRYLDASSLRISSFSKSFNHLLNLQALILSNTYLKTLPTNIGCLQKLQYFDLSGCANL
NELPTSFGDLSSLLFLNLASCHELEALPMSFGNLNRLQFLSLSDCYKLNSLPESCCQLHD
LAHLDLSDCYNLGKLPDCIDQLSKLEYLNMTSCSKVQALPESLCKLTMLRHLNLSYCLRL
ENLPSCIGDLQLQSLDIQGSFLLRDLPNSIFNMSTLKTVDGTFTYLVSSKVEKLRENLKL
EGCCKLDGGSTDLCSRITELKKTHCHELEIQGLEDFKHLEGIEHAILLNSLKLTKLIFSW
QPKQYTNETAHHKTVLGMLVPPRSVHHLAIKGYCGIELPKWMLDIRSYLPHLTTIFLHGL
MECNRLPPLGCLPHLRALLMTKMPKIKSVGPEFYGDYGSCQKLRMIILASMDNLEEWWTT
RSSKQDNELSLIPDLQMLWASDCPKLKFLPYPPRSLTWFIENSNHVLPEHGFGNLTSATY
PLHLSIERAPNSREMWRRAQHLSSIESLTLMSIAGLRALPEAIQCFTSLWRLSILGCGEL
ETLPEWLGDYFTCLEEISIDTCPMLSSLPESIRRLTKLKKLRITNCPVLSEKCQGEDRHK
IAHILEPIFL
Download sequence
Identical sequences OsIBCD005078

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]