SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for OsIBCD026682 from Oryza sativa ssp. Indica

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  OsIBCD026682
Domain Number 1 Region: 326-775
Classification Level Classification E-value
Superfamily Ribonuclease H-like 6.9e-84
Family Hermes transposase-like 0.0007
Further Details:      
 
Domain Number 2 Region: 7-16
Classification Level Classification E-value
Superfamily Formin homology 2 domain (FH2 domain) 0.00000628
Family Formin homology 2 domain (FH2 domain) 0.064
Further Details:      
 
Domain Number 3 Region: 188-237
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000069
Family Classic zinc finger, C2H2 0.049
Further Details:      
 
Weak hits

Sequence:  OsIBCD026682
Domain Number - Region: 268-323
Classification Level Classification E-value
Superfamily Hermes dimerisation domain 0.00392
Family Hermes dimerisation domain 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) OsIBCD026682
Sequence length 792
Comment 792
Sequence
MDSMPPPPPPPPPPPPPQPSPPPPPPFLVISHTSASTAASNAPFKGPSWSSPVMVAHSSL
LVTPTPPVLSISVGGAILASASILSTSTQVTREGGVLASNTSRAKAKRNAPTSKQLKHST
TKRSKPTMVTMVRSPGIRIMMSPMLRSPIPRALSPPPTHERSPSSSPEEATTLQHRSSRS
KSKRKLRSIVWKDFDPIYEGEVLTGAQCVHCGKMLKATRDVGTSSCHRHLLKCKGKARMD
QMYSQLMGVSSDTSCADALTNWTFDQHVSRRKLLELIVAHELPFSFVEYSKFRTFVASLN
PCFNHISRNTIKADCISEYQNQKVDLQVVLSGSNSRLSLTADMWTSKQKLGYLCITCHFI
DDKWKLKKRIIRFALVETPHDGKNMLSAMVKALQDWNIEHKLFSIALDNASVNDSFMSSL
KENLVERKLLPSNGDLFHSRCAAHILNLIVQDGLSAISGATHKIRESVRYVGASQARKQR
FKEMIRQVGLPKMKWPFLDVPHRWNATYDMLTSALPYKRAFKALAREEPNYKHLPSDNEW
GMARKLCSMLIVFHKATLTVSGSKYPTSNLWFHEIWEVKKLLDTEILNSHPNIVSMAYEM
IHKFEKYWKLSFLQICIPVILDSRFKLTFLEYRLNTIRELFAEYSSKMGSLQESNIVDLN
ADGNNPCSDGSSRWSDWGQHVDAQKRKRANELDRYLEEEVVSIGADFDILQYWKMFSPKY
PILAQMACDILTIPASTVPSESAFSTGGRVISDYRSSLSSETIQALICLQSWIRAEDTEI
NDSENDEDDMSI
Download sequence
Identical sequences OsIBCD026682

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]