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Domain assignment for OsIBCD030472 from Oryza sativa ssp. Indica

Domain architecture


Domain assignment details

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Strong hits

Sequence:  OsIBCD030472
Domain Number 1 Region: 177-395
Classification Level Classification E-value
Superfamily RNI-like 4.94e-26
Family Cyclin A/CDK2-associated p19, Skp2 0.029
Further Details:      
 
Domain Number 2 Region: 501-785,821-879
Classification Level Classification E-value
Superfamily RNI-like 2.25e-20
Family Cyclin A/CDK2-associated p19, Skp2 0.0064
Further Details:      
 
Domain Number 3 Region: 351-509
Classification Level Classification E-value
Superfamily L domain-like 0.000000164
Family Ngr ectodomain-like 0.051
Further Details:      
 
Weak hits

Sequence:  OsIBCD030472
Domain Number - Region: 155-187
Classification Level Classification E-value
Superfamily F-box domain 0.000183
Family F-box domain 0.0057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) OsIBCD030472
Sequence length 911
Comment 911
Sequence
MRWTMPPHSWDHDAAGSSRAATHVPPLRCRDIWHGDNDAGGAIEGAEEGDEEDEEGDEDG
DRDLQSKRPKVRGFGEESPQHSGVNASFFGLESTHFPGSDEHGHFKLSHCPENELDFGLS
LFPNDGVNENPGDGNVGDVEISGGENSEDVEIRMDLSDDLLHLIFSFLGQRDLCKAGASC
KQWRSASMHEDFWKCLKFENTRISLQNFVDICHRYQNVTYLNLSGVPHAELLVMEAITCL
RHLKTLIMGKGQLGEAFFQLLSECPLLTTLTVSDASLGSGIQEVTVNHDGLRELQILKCR
ALRISVRCSQLQILSLRRTGMAHVSLNCPQLVELDFQSCHKLSDNAIRQAATACPLLASV
DMSSCSCVTDETLREIANSCPNLSVLDASNCPNISFESVRLPMLVDLRLLSCEGITSASM
AAIAYSRLLEALQLDNCSLLTSVSLDLPHLKNISLVHLRKFAELTLRSPVLSYIKVSRCS
VLHRVSITSNALQKLVLQKQESLSSLSLLCNNLIDVDLSDCESLTNAVCEVFSDGGGCPL
LRSLILDNCESLSTVELNSSSMVNLSLAGCRSMTLLKLSCPNLQNVNLDGCDHLERASFC
PVGLESLNLGICPKLSDLHIEAPKMSLLELKGCGVLSQASINCPRLTSLDASFCRKLMDD
SLSQTAEACPLIENLILSSCVSIDLNGLSSLHCLHKLALLDLSYTFLTNLKPVFDSCPQL
KILKLSACKYLSDSSLDALYREGALPMLVELDLSYSSIGQTAIEELLSCCTNLVNVNLNG
CTNLHQLVCGSDDCSSGDMPVDVCPPDSAPVRSEEISESNCSSLEVLKLDCPRLTNLQLL
ACTMLQDEELESAISRCSALEILNVHSCPKINVLDFSRLRVLKGNYAPPVYRFADEVWQS
WRPIGGVRFDA
Download sequence
Identical sequences OsIBCD030472

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