SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Sorbi1|5035183|Sb03g004850 from Sorghum bicolor

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Sorbi1|5035183|Sb03g004850
Domain Number 1 Region: 513-807
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 3.1e-71
Family Protein kinases, catalytic subunit 0.00027
Further Details:      
 
Domain Number 2 Region: 67-212
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 1.02e-22
Family alpha-D-mannose-specific plant lectins 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Sorbi1|5035183|Sb03g004850
Sequence length 820
Sequence
MARYGTCLGFVLLLAVVVPCPSAPEPAQPHTLGTGSSLSVEDHGRPFLTSPDGTFSCGFQ
GAGENAFSFSVWYTDATEKTAIWTANPGAPVNGRGSRISFRRDGGLALDDANGSTVWESK
TSGGGGADLTISLLDTGNLLISDRPSTATGGGGRRTLWQSFDWPTDTLVPSQPLTKDKKL
VAGYFSLYYDNDNVLRLLYDSPNISSIYWPNNLMNDPFQNGRTTYNSSRIGVLDDDGVFL
SSDNLGVHASDFGPGVKRRLTMDRDGNVRIYSMNASTGGWAVTWAALGQPCSTHGLCGQN
ALCEYQQPGLRCSCPPAYEMVDRQDWRKGCQPMFTVTNCSQPWSPEQQFKFLKLPHSDFY
GYDLQFNQSVTFEYCKKLCLKMCLCVGFSYKLEGQGVCYPKSILFNGFTSSAFSGTIYLK
VPIDFNASAPLVMARSAAGLACDPNNSVIVQRSEGTFSRTENNGTKWVYLFAFAGVLGVL
DIIFIATSWWFLSSKQSILPSSLEAGYRMVTGQFRRFTYRELKDATGNFKEELGRGGSGV
VYRGVLDKGKKVVAVKKLTNVAGGDEEFWAEMTLIGRINHINLVRIWGFCSQGKHKLLVY
EYVENQSLDRHLFDTDRTTTTLPWRERYRIALGTARGLAYLHHECLEWVIHCDVKPENIL
LTREFDAKIADFGLAKLSKRDSAAAAAAGMPLSHMRGTTGYMAPEWALNVPINAKVDVYS
YGVVLLEMVMGCRVCDQTTAAGERLDMSQIAQALRQVVASGNVEPLVDGRLQGQFHPRQA
LEMVRISLSCMEDRSNRPTMDDVAKALTACDDEDEHPAYR
Download sequence
Identical sequences jgi|Sorbi1|5035183|Sb03g004850 4558.Sb03g004850.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]