SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Sorbi1|5042604|Sb06g029770 from Sorghum bicolor

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Sorbi1|5042604|Sb06g029770
Domain Number 1 Region: 496-803
Classification Level Classification E-value
Superfamily Protein kinase-like (PK-like) 3.51e-82
Family Protein kinases, catalytic subunit 0.00015
Further Details:      
 
Domain Number 2 Region: 76-183
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 1.16e-25
Family alpha-D-mannose-specific plant lectins 0.0043
Further Details:      
 
Weak hits

Sequence:  jgi|Sorbi1|5042604|Sb06g029770
Domain Number - Region: 348-410
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.0706
Family Hairpin loop containing domain 0.065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Sorbi1|5042604|Sb06g029770
Sequence length 807
Sequence
MSFLNLSAMIFPVLLLFLRASAAGIASDTLNNGGNITDGETLVSSGSTFTLGFFSPTGVP
AKRYLGIWFTASPDAVCWVANRDTPISNTSGLGVMVVGSSGSLRLLDGSGQTAWSSNTTS
SAPAVAQLLESGNLVVREQSSGDVLWQSFDHPSNTLLAGMRLGKDPRTGAEWSLTSWRAP
NDPTTGDCRRVMDTLGLPDCVSWQGNAKKYRTGPWNGLWFSGVPEMASYSELFSNQVIVR
PNEIAYIFNTSSDAPFSRLVLNEVGVLHRLAWDPASRVWNTFAQAPRDVCDDYAMCGAFG
LCNVNTASTLFCSCVVGFSPVNPSQWSMRESGGGCRRNVPLECGNGTTTDGFRVVRGVKL
PDTDNTTVDMNATLEQCRARCLADCSCVAYAAADIRGGGDGSGCVMWKDNIVDVRYVDKG
QDLYLRLAKSELANRKRMDVVKIVLPVTASLLVLVAAAMYLVWKCRLRGQQRNKDIQKKA
MVGYLTTSHELGDENLELPFVSFEDIVTATDNFSEDNMLGQGGFGKVYKGMLGEKKEIAI
KRLSQGSGQGAEEFRNEVVLIAKLQHRNLVRLLGCCICGDEKLLIYEYLPNKSLDSFIFD
AARKKLLDWPTRFKIIKGISRGLLYLHQDSRLTIVHRDLKPSNILLDADMSPKISDFGMA
RIFGGNQHEANTNRVVGTYGYMSPEYAMDGAFSVKSDTYSFGVILLEIISGSKISLTHIT
DFPNLLAYAWSLWNEGKAMDLVDSSLVKSCLPNEAFRCIHIGLLCVQDNPNSRPLMSSVV
FMLENETTALPVPKQPVFFSQRSPVIH
Download sequence
Identical sequences 4558.Sb06g029770.1 jgi|Sorbi1|5042604|Sb06g029770

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]