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Domain assignment for jgi|Sorbi1|5051053|Sb02g021800 from Sorghum bicolor

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Sorbi1|5051053|Sb02g021800
Domain Number 1 Region: 79-194
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 6.15e-27
Family alpha-D-mannose-specific plant lectins 0.0036
Further Details:      
 
Weak hits

Sequence:  jgi|Sorbi1|5051053|Sb02g021800
Domain Number - Region: 299-331
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0431
Family EGF-type module 0.031
Further Details:      
 
Domain Number - Region: 371-418
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.0471
Family Anti-platelet protein 0.083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Sorbi1|5051053|Sb02g021800
Sequence length 1328
Sequence
MDRSAAVLLLLLLLLPPPCAPDDRLVLDKPLTAGTTIVSGGGGFALGFFSPTTDSTPANN
NNKLYLGIWYADDVPTRTVVWVANRDAPATNTTAPTLSLTNTANLVVSDGSGRVLWTTNV
TGVVVPTTSSSPSPTAVLLDTGNLVVRHPNGSTLWQSFEHPADSFLPGMKLRVNYGTRAG
DERRLVSWRTPDDPSPGSFAYAVDPDTALQIFLWNGTRPLMRDGPWTGYSVASKYQANAS
VFVYQAVVSTDEEIYLTYTLSDGAARTRFVVTAAGQYQLQSWSASSSAWTVLGSWPTWEC
NRYGHCGRYGYCDNTMAAPTCRCLDGFEPADSKEWTRGVFSQGCRRQEPLRCADGDGFLA
LPGMKSPDRFVLVANRTLDECRAACTGNCSCVAYAYANLSTTKKTGDVTRCLVWAGDLID
TEKQAAMRTRRPPGPRQASHRRHHHSIRRRRLRPGLLLPHHRLHSGQQQQQAVPRHMVRR
RRPNAHRGVGGQQRRPGHQHHRTYAVPNQHGQPRRVRRQRPCPLDDQRHRRRRPHHLLLP
VPHRGSPRHREPRGPAPERQHLVAELRAPGRLVPPRHEAPGQLRHARRRRAPPGVVEDPR
RPFAGELRLRRGPGHGAADLPLERDAPADARRAMDGLLRRQQVPGQRQRLRLPGRRQHRR
GDLPHLHPLRRRCAHQVRRHGRRPVPAPELERQLVGVDGPRLLADLGVQPLRPLRALRLL
RQHHGRADVQVPRRLRACRLQGVDPRRLLAGLPATGAAAVRRRRRILGLAGDEIAGQVRA
RRQPNLGRVPGGVHRQLLLCGLRLCQPEHHQEDGRRDEVLGVGRRPHRHGEAGLFCILAL
HRCRQTKEQXCTEDCSAYGFDKXHSHNHSHFPCLVXIQRFVLYTGFAXVSTDERAIMHXG
LLCLRFXQVAFSXSQSFSLPGLNSKDVXGGIMRITIRXVMVVRVSLMTSLKEAQHKISNF
PSSNLRILRLRLTISQRRIRLDKEALGKCTRTYEGEXXGXQXDKSWWYEYLXXPRXRKLS
TRFRTSLRQIXGYXGCDSQFLRGVXDWTRRLWESVQGLDWWSGSCYQKAKXRFRTRNRGI
QEXSYSNCQIATXKFGSAAWLQRGGWXKNPDIXIFAXXKLRCYPFWPXLVVRKLLSKGXV
KIQNKEPWNSGMKLFXLPNCNIEIWFGCLVAAWRVVKKSXYMNICLIEAMLSFLIIQEKC
CXIGQHGLIXSKGLQGDFFTCTKIQDXPXFIEISKLPMFCSTQRXDPRXQTLVWQGSLVT
TRKMQIRDESWEHMATWLLSMQWKESSLSSLMSIALASXSWSLXLVXGEALLTKSRTFPT
LXSIXFKK
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Identical sequences jgi|Sorbi1|5051053|Sb02g021800

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