SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Sorbi1|5028853|Sb01g017420 from Sorghum bicolor

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Sorbi1|5028853|Sb01g017420
Domain Number 1 Region: 63-161
Classification Level Classification E-value
Superfamily alpha-D-mannose-specific plant lectins 1.18e-25
Family alpha-D-mannose-specific plant lectins 0.0029
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) jgi|Sorbi1|5028853|Sb01g017420
Sequence length 184
Sequence
MGFLPIHRIILLCFCSLLPPPVSSDSRLLPNKPLTVGSTLISDDGTFALGFFSPSNSTQK
HYFYVGIWYNKIPKDNVVWVANRATPVTDPSSATLALTNTSNLVLSSTNSQMLWTANISS
ASETTAGEATLDNTGNFILRTSEGVVLWQSFDYPADTLLPGMKFRVTHHWRTQYMDMGVQ
MYTQ
Download sequence
Identical sequences jgi|Sorbi1|5028853|Sb01g017420 XP_021307165.1.57931 XP_021307166.1.57931 4558.Sb01g017420.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]