SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSOCUP00000017276 from Oryctolagus cuniculus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSOCUP00000017276
Domain Number 1 Region: 538-629
Classification Level Classification E-value
Superfamily Small-conductance potassium channel 4.45e-41
Family Small-conductance potassium channel 0.00000363
Further Details:      
 
Domain Number 2 Region: 407-579
Classification Level Classification E-value
Superfamily Voltage-gated potassium channels 9.29e-27
Family Voltage-gated potassium channels 0.004
Further Details:      
 
Weak hits

Sequence:  ENSOCUP00000017276
Domain Number - Region: 41-192
Classification Level Classification E-value
Superfamily Formin homology 2 domain (FH2 domain) 0.0418
Family Formin homology 2 domain (FH2 domain) 0.13
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000017276   Gene: ENSOCUG00000013552   Transcript: ENSOCUT00000024871
Sequence length 725
Comment pep:known_by_projection chromosome:OryCun2.0:13:37786000:37942487:1 gene:ENSOCUG00000013552 transcript:ENSOCUT00000024871 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDTSGHFHDSGVGDLDEDPKCPCPSSGDEQQQQQQQQQLPPPPVPPAAPQQPPGPSLQPQ
PPQLPQQQPPPPPPPSHPLSQLTQLQSQPVHPGLLHSSPTAFRAPTSGNSTATLHPSSRQ
GSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASPLVHRRDSNPFTEIAMSSCKYSGGVMK
PLSRLSASRRNLIEAEPEGQPLQLFSPSNPPEIVISSREDNHAQQTLLHHPNATHNHQHA
GPPASSTTFPKANKRKNQNIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSW
GLYSKDSMFSLALKCLISLSTIILLGLIIAYHTREVQLFVIDNGADDWRIAMTYERILYI
SLEMLVCAIHPIPGEYKFFWTARLAFSYTPSRAEADVDIILSIPMFLRLYLIARVMLLHS
KLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHD
QQDVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKL
ELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFLQ
AIHQLRSVKMEQRKLSDQANTLVDLSKMQNVMYDLITELSDRSEDLEKQIGSLESKLEHL
TASFHSLPLLIADALRQQQQQLLSAVLEARGVSVAVGTTHAPLSESPIGVSSTSFPTPYT
SSSSC
Download sequence
Identical sequences G1TJZ5
9986.ENSOCUP00000017276 XP_002715501.1.1745 ENSOCUP00000017276 ENSOCUP00000017276

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]