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Domain assignment for ENSOCUP00000018317 from Oryctolagus cuniculus 76_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOCUP00000018317
Domain Number 1 Region: 202-465
Classification Level Classification E-value
Superfamily L domain-like 1.31e-37
Family Ngr ectodomain-like 0.013
Further Details:      
 
Domain Number 2 Region: 760-909
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 6.15e-30
Family Toll/Interleukin receptor TIR domain 0.0003
Further Details:      
 
Domain Number 3 Region: 492-690
Classification Level Classification E-value
Superfamily L domain-like 0.00000000016
Family Ngr ectodomain-like 0.05
Further Details:      
 
Domain Number 4 Region: 45-244
Classification Level Classification E-value
Superfamily L domain-like 0.0000000612
Family Leucine rich effector protein YopM 0.039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000018317   Gene: ENSOCUG00000026685   Transcript: ENSOCUT00000024127
Sequence length 920
Comment pep:novel chromosome:OryCun2.0:17:40542365:40545127:1 gene:ENSOCUG00000026685 transcript:ENSOCUT00000024127 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKRCLFSTLLLPCMMSFSLRSWAWTAPDCTVGDASLLSNLSFYVPFCSLVPGLHLFASCS
NVKDLPQTLASVPRDIEALCLQGTVPILPDDAFGLFSSLQLLRLQLGTTKVAAGAFQGLH
QLQHLSFEHHAPCCLNLFLPQDTLESLRFLNSISFQGYCLNYSQSIQLPISLSHLTLKHS
CLTELQELQKLFPNLGSGFSPTHSPRPWSPFLEVLDLSSNLHLSQVGVGALKGLHLRSLR
LDGTPLNTTGLLDSGLLHLDSLSLVHTGVNKLPGNVTGYFELGALDLGRNQIQNIKDEDL
PSLHSLEVISLYANSLQLLPPGFFSALPQLQRLNLSMNKLGPTLVLPQGWSSNLKVLDLS
HNELCTLPHGAFSSLPQLQELWLSGNNISSLSSENLEGLRQLKSLDLSWNQIKVLKPGWL
SPLPALTSLNILGTYLETISGRHLQGPRKLSHLQLGSVAMLDIYPPWPPELLSLEVWAQP
SVFFHVANGEPFLFLENLTLQSSNVVLVPFNATIHFPSLRHLTLRGCSPFIFSSPDSRFF
PQLPLLEHLHFWSGHEDAENLHLSITPKLRVLELGDMDFFYNLGSVTLEEVLKEVPQLQV
LALSHLNLRNLSISTFRGLGLLRLLLLNSEWDLGLDSSLQEMIPQMPEYVYFSNVTFICQ
CESSWVGPWATGAPNTFVYGLGDSICMANASDYSKTPLLSFLSSHCAHDPNFQGFLISFI
LVLLLMISALLGCPKWPWLRQLRKLFYAWWWKLCGRGPRSAFRYDVFISYCEQDQAWVLD
KLVPALEKPPPAGEGLRLCLPERDFGIGQDRMDATAASMESSRTTLCVLSCQALRSPWCN
LELRLATYHLVARPGAARLTLLFLEPIDRRQLHSYHRLTRWLQKEDYFDVPQAGVQWDDF
CEQLRKRLKRAEQEREDCVL
Download sequence
Identical sequences G1TMV3
ENSOCUP00000018317 XP_002717903.1.1745 XP_017203404.1.1745

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