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Domain assignment for ENSOCUP00000023151 from Oryctolagus cuniculus 76_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOCUP00000023151
Domain Number 1 Region: 10-228
Classification Level Classification E-value
Superfamily Nicotinic receptor ligand binding domain-like 3.92e-58
Family Nicotinic receptor ligand binding domain-like 0.0017
Further Details:      
 
Domain Number 2 Region: 228-488
Classification Level Classification E-value
Superfamily Neurotransmitter-gated ion-channel transmembrane pore 2.35e-48
Family Neurotransmitter-gated ion-channel transmembrane pore 0.000000846
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000023151   Gene: ENSOCUG00000024541   Transcript: ENSOCUT00000031268
Sequence length 505
Comment pep:known_by_projection scaffold:OryCun2.0:GL018736:149105:154397:1 gene:ENSOCUG00000024541 transcript:ENSOCUT00000031268 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LCLAATLGRNQEERLLADLMRDYDPHLRPAEHDSDVVNVSLKLTLTNLISLNEREEALTT
NVWIEMQESDYRLRWDPQDYEGLWVLRVPSTMVWRPDIVLENNVDGVFEVALYCNVLVSP
NGCIYWLPPAIFRSSCAISVTYFPFDWQNCSLVFQSQTYSTSEINLQLSQEDGQTVEWIF
IDPEAFTENGEWAIRHRPAKMLLDPAAAADEEAGPQKVVFYLLIQRKPLFYVINIIAPCV
LISSVAILIYFLPAKAGGQKCPVAINVLLAQTVFLLLWPRRCPETSQAVPAHQQTPPFLL
VVTILIVVNAVVVLNVSLRPHTHSMARGVRKVFLRLLPQLLRMHVRPPAPAARQDARPRL
QNGSSSGWSLTAGEEVALCLPRTELLFRQRQRNGLVRAALEKLEKGPGPGQSQELCGSLK
QAAPAIQACVEACNLIARAQHQQSHFDSGSEEWFLVGRVLDRVCFLAMLSLFVCGTSGIF
LMAHYNRVPELPFPGDPRPYLPSPD
Download sequence
Identical sequences G1U1B7
9986.ENSOCUP00000023151 ENSOCUP00000023151 ENSOCUP00000023151

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