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Domain assignment for ENSOCUP00000001716 from Oryctolagus cuniculus 76_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOCUP00000001716
Domain Number 1 Region: 113-174,430-575
Classification Level Classification E-value
Superfamily Pectin lyase-like 1.19e-23
Family Pectate lyase-like 0.052
Further Details:      
 
Domain Number 2 Region: 729-895
Classification Level Classification E-value
Superfamily Pectin lyase-like 3.32e-17
Family Galacturonase 0.069
Further Details:      
 
Domain Number 3 Region: 11-84
Classification Level Classification E-value
Superfamily F-box domain 2.62e-16
Family F-box domain 0.0035
Further Details:      
 
Domain Number 4 Region: 545-678
Classification Level Classification E-value
Superfamily Pectin lyase-like 4.11e-16
Family Galacturonase 0.063
Further Details:      
 
Weak hits

Sequence:  ENSOCUP00000001716
Domain Number - Region: 124-265
Classification Level Classification E-value
Superfamily Pectin lyase-like 0.000164
Family Pectin methylesterase 0.088
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000001716   Gene: ENSOCUG00000001992   Transcript: ENSOCUT00000001989
Sequence length 957
Comment pep:known_by_projection chromosome:OryCun2.0:1:16514248:16543848:1 gene:ENSOCUG00000001992 transcript:ENSOCUT00000001989 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQEVTMEAGGLPLELWRMILAYLHLPDLGRCSLVCRAWYELILSLDSTRWRQLCLGCTEC
RHPNWPNQPDVEPESWREAFKQHYLASKTWTKNALDLESSVCFSLFRRRKERRTLSVGPG
REFDSLGSALAMASLYDRIVLFPGVYEEQGEIILKVPVEIVGRGKLGEVALLASIDQHCS
TTRLCNLVFMPAWFSPIMYKTTSGHVQFDNCNFENGHIQVHGPGTCQVKFCIFKNTHVFL
HNVPLCVLENCEFVGSENNSVTVEGHPSADKNWAYKYLLGLIKSSPSLLPTEDSDFLMSV
DLESRDQAWSPKTCDIVIEGSQSPPSPASSSSKAGSQETEGGSDGERVAQTPDSSDGGLS
PSGEDEDEDQLTYRLSYQVQGPRPVLGGSFLGPPLPGASIQLPSCLVLNSLQQELQKDKE
AMALASSVQGCLIRKCLFRDGKGGVFVCSYGRAKMEGNVFRNLTYAVRCIHNSKIVMLRN
HIHRCRASGIFLRLEGGGLIAGNNIYHNGEAGVDIRKKSNPLILCNQIHHGLRSGIVVLG
NGKGVIRNNQIFSNKEAGIYILYHGNPIVSGNHIFKGRAAGIAVNENGKGLITENVIREN
QWGGVDIRRGGVPVLRSNLICFGYSDGVVVGDEGKGLIEGNTIYANKGCGVWMMSSSLPH
VTSNHVSYNGLYGVAVFSQKDGASEFPGGHGAQENFSEDGDAILWEPELEKDDDPLRRPV
TVALVESNSVNHNGASGLYVQSSEALHVTANVIHANGDRGITVAQSSQLTRVANNSISCN
RQSGVKVEAQCKVELRGNGIYDNRGHGVITKGDSTVVIENDIIGNRGSGLQLLPRSDTKV
IKNRIHSFRAYGIAVRGRAKALVQDNIIFQGKTSKTIFQQIANNRDCVMQNNKFLVFRKK
SDTWRLVNPPARPHLENPLRGPSAGHSGQKVTAMGTRITARVEGGYHSNRSIFCTIL
Download sequence
Identical sequences G1SGK2
ENSOCUP00000001716

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