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Domain assignment for ENSOCUP00000010508 from Oryctolagus cuniculus 76_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOCUP00000010508
Domain Number 1 Region: 34-125
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 8.24e-38
Family SCAN domain 0.0000409
Further Details:      
 
Domain Number 2 Region: 470-527
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.3e-25
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 3 Region: 583-640
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.8e-23
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 4 Region: 629-681
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.27e-18
Family Classic zinc finger, C2H2 0.0023
Further Details:      
 
Domain Number 5 Region: 433-484
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.67e-18
Family Classic zinc finger, C2H2 0.0057
Further Details:      
 
Domain Number 6 Region: 516-558
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000212
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 7 Region: 375-416
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000488
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number 8 Region: 212-264
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00000183
Family KRAB domain (Kruppel-associated box) 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000010508   Gene: ENSOCUG00000012210   Transcript: ENSOCUT00000012209
Sequence length 683
Comment pep:known_by_projection scaffold:OryCun2.0:GL018828:518692:529149:1 gene:ENSOCUG00000012210 transcript:ENSOCUT00000012209 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MASGPSSQEREGLLIVKLEEDCAWSQELPPPDPGPSPEASHLRFRRFRFQEAAGPREALS
RLQELCHGWLRPELRTKEQILELLVLEQFLTILPQEIQSRVQELHPESGEEAVTLVEDMQ
RELGRLRQQVTTRGRGTEVLLEEPLPLETARESPSFKLEPMETERGPGPRLQELLGPSPQ
RDPQAVKERAVSAPWLSLFPHEGTAEDKALTGPQLPESLENVAVYISQEEWGRQCPRSRA
LASDMAPESSEAVGSLDPHIPRQEALDARVEEGGKVRDSSLRSCKEGLSPSSPAPGEEKF
EDPEESAQFSSPVNSHSEAPPSGQARGEVPWSPEPGRPRDRAEWHWEPPSEDRTEQTLTG
ATSYRELGRPKEVPKKLHLCPLCGKNFSNNSNLIRHQRIHAAERLCVGVECSDLFGGNPH
FLSLHRAHLGEEAHKCLECGKCFSQNTHLTRHQRTHTGEKPYQCNICGKSFSCNSNLHRH
QRTHTGEKPYKCPECGEIFAHSSNLLRHQRIHTGERPYKCPECGKSFSRSSHLVIHERTH
EKERLYPFSECGEAVSDSAPFLPNHGTHKAEKKLFECLTCGKSFRQGMHLTRHQRTHTGE
KPYKCTLCGENFSHRSNLIRHQRIHTGEKPYTCHECGDSFSHSSNRIRHLRTHTGERPYK
CSECGESFSRSSRLMSHQRTHTG
Download sequence
Identical sequences G1T2U4
XP_002722814.1.1745 ENSOCUP00000010508 9986.ENSOCUP00000010508 ENSOCUP00000010508

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