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Domain assignment for ENSOCUP00000013149 from Oryctolagus cuniculus 76_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOCUP00000013149
Domain Number 1 Region: 215-267
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000621
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 2 Region: 185-227
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000337
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 3 Region: 295-332
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000273
Family Classic zinc finger, C2H2 0.013
Further Details:      
 
Domain Number 4 Region: 13-39
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.0000288
Family KRAB domain (Kruppel-associated box) 0.0059
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000013149   Gene: ENSOCUG00000015309   Transcript: ENSOCUT00000015305
Sequence length 341
Comment pep:novel scaffold:OryCun2.0:GL018890:130032:137040:-1 gene:ENSOCUG00000015309 transcript:ENSOCUT00000015305 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSQHTVAPHSRRGDMILCFSEEDWSLLDPGQTGFYGEFIIGEDCGVSVTPTDDPAALPGP
FQGEERELLPELLELQGKEAPQASPTVPCKDLPALQLFEVEERRKWDELQVLESQAFQQT
ALPPSTQPAGGGPQILENGLQEEEEEVTIEIVLSSSGDEDSQHSPHGPQPCQGSEEIAGE
VPASRKAYVCPACGKAFCWRVNFVRHLRSRWDREKPHVCPVCGKLFSEGEDLDGHLEAHE
AQKPYRCGSCERSFHLNSHLLSHRRIHRQPSRLEPEKQSEEGLGFQHREPLAWHRGHTHQ
KDAMWPFQCRYCVKSFGQNSDLLRHERVHMKRRSKQALNSY
Download sequence
Identical sequences G1T955
ENSOCUP00000013149

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