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Domain assignment for ENSOCUP00000018789 from Oryctolagus cuniculus 76_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSOCUP00000018789
Domain Number 1 Region: 329-403
Classification Level Classification E-value
Superfamily Starch-binding domain-like 0.0000000000883
Family Rhamnogalacturonase B, RhgB, middle domain 0.02
Further Details:      
 
Domain Number 2 Region: 127-202
Classification Level Classification E-value
Superfamily Starch-binding domain-like 0.000000165
Family Rhamnogalacturonase B, RhgB, middle domain 0.017
Further Details:      
 
Domain Number 3 Region: 964-1053
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.000000432
Family Carboxypeptidase regulatory domain 0.021
Further Details:      
 
Domain Number 4 Region: 883-955
Classification Level Classification E-value
Superfamily Starch-binding domain-like 0.00000765
Family Rhamnogalacturonase B, RhgB, middle domain 0.037
Further Details:      
 
Weak hits

Sequence:  ENSOCUP00000018789
Domain Number - Region: 215-299
Classification Level Classification E-value
Superfamily Starch-binding domain-like 0.00179
Family Rhamnogalacturonase B, RhgB, middle domain 0.023
Further Details:      
 
Domain Number - Region: 810-868
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.0051
Family Cna protein B-type domain 0.0097
Further Details:      
 
Domain Number - Region: 442-491
Classification Level Classification E-value
Superfamily Carboxypeptidase regulatory domain-like 0.00549
Family Carboxypeptidase regulatory domain 0.017
Further Details:      
 
Domain Number - Region: 51-114
Classification Level Classification E-value
Superfamily Cna protein B-type domain 0.0322
Family Cna protein B-type domain 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSOCUP00000018789   Gene: ENSOCUG00000025719   Transcript: ENSOCUT00000026497
Sequence length 1222
Comment pep:known chromosome:OryCun2.0:6:10694028:10753797:-1 gene:ENSOCUG00000025719 transcript:ENSOCUT00000026497 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
XVVRGGSGPVCGGVVAAVAVLLLSGVGPAHGSEDIVVGCGGFVKSDVEINYSLIEIKLYT
KHGTLKYQTDCAPNNGYFMIPLYDKGDFILKIEPPLGWSFEPTNVELYVDGVNDICTKGG
DINFVFTGFSVNGKVLSKGQPLGPAGVQVSLRSTGTEAKIQSTVTQPGGKFAFFKVLPGD
YEILATHPTWALKEASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSS
LVTKEDVLGCSVSPVPGFQPPDESLVYLCYAVSKEDGSFSFYSLPSGDYTVIPFYRGERI
TFDVAPSRLDFTVEHDSLRIEPVFHVMGFSVTGRVLNGPEGEGVPEAVVTLNSQIKVKTK
ADGSFRLENITTGTYTIQAHKDHLYFDTVTIKIAPNTPQLADIIATGFSVCGQISILRFP
DTVKQMSKYKVVLSSQDKDKSLVTVETDAHGSFCFKAKPGSYKVQVLVPEAESRAGLTLK
PHVFPLTVTDRPVMDVAFVQFLASVSGKVSCLDTCGDLLVTLQALSRQGEKRSLQLSGKV
NSMTFTFDNVLPGKYKVSIVHEDWCWKNKSVEVEAVEEDVAAVEFRQTGYMLRCSLSHAI
TLEFYQDGNGPENVGIYNLSKGVNRFCLSKPGVYKVTPRSCHRFEQAFYTYDTSSPSILT
LTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQQLAQIETRRQE
REKNGKEEGGEGSTKPPVQEMVEELQGPFSYDFSYWARSGEKITVTPSSKELLFYPPSME
AVVSGESCPGKLIEIQGKAGLFLEGQIHPELEGVEIVISEKGASSPLITVFTDDRGAYSV
GPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKAYALAGVSFEIKAEDDQPLPGVLLSLSGG
VFRSNLLTQDNGILTFSNLSPGQYYFKPMMKEFRFEPSSQMIEVQEGQNLRITITGYRTA
YSCYGTVSSLNGEPEQGVAVEAVGQKDCSIYGEDTVTDEEGKFRLRGLLPGCVYHVQLKA
EGNDHIERALPHHRVIEVGNNDIDDVNIIVFRQINQFDLSGNVITSSEYLPTLWVKLYKS
DNLDNPIQTVSLGQSLFFHFPPLLRDGENYVVLLDSTLPRSQYDYGLPQVSFAAVGYHKH
VTLIFNPTRKLPEQDIAQGSYIALPLTLLVLLAGYNHDKLIPLLLQLTSRLQGVRALGQA
ASDNSGPEDVKRQAKKQKTRRT
Download sequence
Identical sequences G1TP59
ENSOCUP00000018789 9986.ENSOCUP00000018789 ENSOCUP00000018789

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