SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSORLP00000020118 from Oryzias latipes 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSORLP00000020118
Domain Number 1 Region: 195-270
Classification Level Classification E-value
Superfamily ClpS-like 2.72e-16
Family Adaptor protein ClpS (YljA) 0.026
Further Details:      
 
Domain Number 2 Region: 740-819
Classification Level Classification E-value
Superfamily "Winged helix" DNA-binding domain 0.0000000182
Family ELL N2 domain-like 0.037
Further Details:      
 
Weak hits

Sequence:  ENSORLP00000020118
Domain Number - Region: 1127-1184
Classification Level Classification E-value
Superfamily RING/U-box 0.000883
Family RING finger domain, C3HC4 0.035
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSORLP00000020118   Gene: ENSORLG00000016076   Transcript: ENSORLT00000020119
Sequence length 1724
Comment pep:known_by_projection chromosome:MEDAKA1:22:12090112:12105149:1 gene:ENSORLG00000016076 transcript:ENSORLT00000020119 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
WQQASDCRAELLGYLKEQVPQIFCLRKEYSPQEEEELLQSRLLHPLECFLFGEDPQQGLE
KLKQGSTSSQLCGRVFKEGETVYSCRDCAIDPTCVLCMDCFQDSVHKSHRYKMHASSGGG
FCDCGDVEAWKIGPCCSKHDPGAATAMVTVSYVSKGEDGCRRIKKLFRVLLRYLTDFLVW
EENFELSAELQPGTKENAYYCVLYNDEHHSYDHVIYTLQRSVNCNQDEAKTHTTLIDKEG
RRAVKRGTLRSCQQAKDLIKSNSEHISLQPLRVEILHAVVMAHQTFAIRLGSWFQKIIGY
SVGFRQVFCQVALEPNADRDRPCLISRLMLHDAKMYKGARKIVHELIFCSMLMDTEFKKL
FAIEFTKYYKQLQKDFIVDDHERSISITALSVQIFTVPTLARQLMEECNVIRVIVDTIMY
LLQEHLDDNNRFYFLGYNSDKFARIQIIFHDLRYVLISKPSVWTHQLRRQFVEGFRVFLG
LLKCMQGMEEVKRQLSQHIAVEPEWEAGFTLQIQMRHILSMFQDWCASDEEILLLAFKEC
HTVLTRCDNQPFRKEAIDFYMCKHILHVQPYKVSQDPVSIHLPISRLFAGLYVLLCGTGV
IEHLDNPESYDFTQLAEHPLRCIVLAAQVSAEMWRRNGLSLVSQVYYYQDVKCRDEMYDK
DIIMLQIAASKMDPNHFLMLVLLRFELFEYFNGCCSSKDQDQLMQWNRLTEEMLYLLIVI
IGERYVPGISRVTKEEVTMREVIHLLCIEPMAHSSLVKSLPENENYETGLEAVISKVATF
KKPGVSGHGRYEVKKDRLIEFNPFFYHYSKSQHSKAEESQKKRKAKEGSEKALPPPVPPA
FCPDFSNIVRLLSCDIIVHILRHVLQRAAEEQPTHWTEAMIQRALHLIGQALLEEKTQLE
ACTVEEVTFDFSLKARLIGSEQDKSVFYLLSKIKTLPSIDAQKDMIMWLLQMFDIIKCLR
EKSSPTVSMATESAKPEESAQDKEKAERKRKAEAAKLHRKRIMAQMSAMQKNFIESNKML
YDNMPESGIQGEPTPAAQSCAVKQKELCIAIGPQRGSTQAEREVLTCILCQEEQEVLPHA
AAMVLTVCVQRSTVLTQCRGKIPTIKADGSGTYPLFTPPNLAIGTHTGSCGHVMHATCWQ
KYFEADQNTTRSRLHAELIIDLENGEYLCPLCKSLCNTVVPLIPLEPLSFDYENAGIIGQ
HLTLPHWIQVLTSRIKGLKALSQENDLIADGSGSSGVYGDSQPDFRSILSFGVQEPRRFS
DSVTEMLVVCATTVHRVGLRTAPNELCPLVPVMAWNTCAFTIHAIENVLQEEDKPIFGSL
QNRQLAGLKAIVQFAASQRLKCSQAVVQRHFKDMMGVLLPAMSRNNTPSILEVDFFHLLV
GLVLSMPSLYQEEAVDLEPSSVSAAYNHLYIFHLVTMAHMLQVLLTSTGTNFPPAADGEE
TEEARAAAELYTTVSKQTGRLIPDLSGSSVAQRVKKGIEPFLRCAALFFNYLTGVHPPEE
LFQTSVTSQGQMEALCNYLALPFNVFQLFQDYRDTISLLLQRWCGSPAVAKALKGKTQTV
SYPRRRNRLIDLPEDYSVLLNQASHFQCPKSTDDERKQPTLCLFCGVMLCSQSSCCLSQL
DGEKVGACTAHAATCGAGVGMFLRIRECEIVLMASKSRGSTYPAPYLDDYGETDPHLGRG
NPLHLCPERYRKLNQLWQQHCILEEIARSLEVVNVMFPFEWHML
Download sequence
Identical sequences H2MN21
8090.ENSORLP00000020118 ENSORLP00000020118 ENSORLP00000020118

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]