SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for Bmb001064 from Bombyx mori

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  Bmb001064
Domain Number 1 Region: 11-251
Classification Level Classification E-value
Superfamily vWA-like 1.62e-79
Family Integrin A (or I) domain 0.000000477
Further Details:      
 
Domain Number 2 Region: 245-339
Classification Level Classification E-value
Superfamily Integrin domains 5.23e-22
Family Integrin domains 0.00074
Further Details:      
 
Domain Number 3 Region: 481-519
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000356
Family Integrin beta EGF-like domains 0.0055
Further Details:      
 
Weak hits

Sequence:  Bmb001064
Domain Number - Region: 525-568
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00014
Family Integrin beta EGF-like domains 0.0053
Further Details:      
 
Domain Number - Region: 397-416
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00474
Family Integrin beta EGF-like domains 0.046
Further Details:      
 
Domain Number - Region: 350-377
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0112
Family Integrin beta EGF-like domains 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Bmb001064
Sequence length 802
Sequence
MQKLTFAYSRAQDYPVDLYYLMDLSRSMKNDKEKLSALGSLLSATMRNMTSNFRIGFGSF
VDKLVMPYVSTVPKNLISPCDNCAAPYGFRNQMSLSKDTDFFEKAVAQADVSGNLDAPEG
GFDAIMQAVVCRQQIGWRDQARRLLVFSTDAGFHYAGDGKLGGIVQPNDGQCHMENNAYT
HSTLQDYPSISQINLKVKKNAINVIFAVTAEQISVYEELSKHIEGSSSGILSEDSDNVVD
LVREQYNKITSTVEMKDSSSDAVQIVYYSSCLGGKDLVQTNKCDGLKVGDMVEFTAEITL
KECPKDRNKWKQLFEISPVGISDSLQVELELLCDCPCERPGHFAYNASPLVCSGEGVSAC
GVCLCSPGRFGKSCECSAQGGVSVEQERGCRPTNATSSPLCSNRGTCICGVCECNKMEDP
TKVLLALDDDSHYNNDEQTNSGCEDIGFEKAAHHENPLVVTAGNYIPDPLDRMVISGPFC
ECDNFTCDRYKGQLCSGHGTCVCGKCSCEPDYGGPACQCLKDTKVCMSPENNKICSGNGK
CVCGQCVCNVDDDKHYSGMYCEKCPTCPGHCGDFKDCVLCEVHKRGPKYNPDTDGCGNCA
LLPIIEEGRIEVHAGPRESKFFRSPTPVLAWSVQASSPARGGEAFTYSVHRLRGTRRHPH
APPSQVHRIGGEGFPKSLALGPIHGGRKRELSALLLRPGGPEVAEVRAGRKSPIPADRSG
VECRGWVGGREDFPLPLQASRLPARIQLGIYKTYVRSCITYAAAAWYHLIPQRMRVRLQA
QQNLALRAIVEAGRNVRNDVIA
Download sequence
Identical sequences Bmb001064

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]