SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Monodelphis domestica 69_5 > ENSMODP00000012949

Domain assignment for ENSMODP00000012949 from Monodelphis domestica 69_5

Domain architecture

Domain assignment details

(show help)
Strong hits

Sequence:  ENSMODP00000012949
Domain Number 1 Region: 1657-1811
Classification Level Classification E-value
Superfamily Spectrin repeat 1.24e-35
Family Spectrin repeat 0.0000112
Further Details:      
 
Domain Number 2 Region: 1442-1597
Classification Level Classification E-value
Superfamily Spectrin repeat 6.81e-32
Family Spectrin repeat 0.00018
Further Details:      
 
Domain Number 3 Region: 736-892
Classification Level Classification E-value
Superfamily Spectrin repeat 1.16e-31
Family Spectrin repeat 0.00043
Further Details:      
 
Domain Number 4 Region: 631-784
Classification Level Classification E-value
Superfamily Spectrin repeat 7.2e-31
Family Spectrin repeat 0.00039
Further Details:      
 
Domain Number 5 Region: 525-679
Classification Level Classification E-value
Superfamily Spectrin repeat 3.89e-30
Family Spectrin repeat 0.00017
Further Details:      
 
Domain Number 6 Region: 313-465
Classification Level Classification E-value
Superfamily Spectrin repeat 9e-30
Family Spectrin repeat 0.00088
Further Details:      
 
Domain Number 7 Region: 216-362
Classification Level Classification E-value
Superfamily Spectrin repeat 9.81e-30
Family Spectrin repeat 0.00038
Further Details:      
 
Domain Number 8 Region: 115-256
Classification Level Classification E-value
Superfamily Spectrin repeat 1.23e-28
Family Spectrin repeat 0.0011
Further Details:      
 
Domain Number 9 Region: 1762-1918
Classification Level Classification E-value
Superfamily Spectrin repeat 1.07e-26
Family Spectrin repeat 0.0000463
Further Details:      
 
Domain Number 10 Region: 14-149
Classification Level Classification E-value
Superfamily Spectrin repeat 1.14e-26
Family Spectrin repeat 0.00000133
Further Details:      
 
Domain Number 11 Region: 1231-1386
Classification Level Classification E-value
Superfamily Spectrin repeat 2.95e-26
Family Spectrin repeat 0.003
Further Details:      
 
Domain Number 12 Region: 1337-1491
Classification Level Classification E-value
Superfamily Spectrin repeat 4.17e-26
Family Spectrin repeat 0.0000886
Further Details:      
 
Domain Number 13 Region: 2030-2143
Classification Level Classification E-value
Superfamily Spectrin repeat 7.59e-24
Family Spectrin repeat 0.00043
Further Details:      
 
Domain Number 14 Region: 970-1051
Classification Level Classification E-value
Superfamily SH3-domain 1.71e-19
Family SH3-domain 0.00012
Further Details:      
 
Domain Number 15 Region: 1869-2023
Classification Level Classification E-value
Superfamily Spectrin repeat 4.58e-19
Family Spectrin repeat 0.001
Further Details:      
 
Domain Number 16 Region: 2147-2256
Classification Level Classification E-value
Superfamily Spectrin repeat 2.88e-17
Family Spectrin repeat 0.0019
Further Details:      
 
Domain Number 17 Region: 890-966,1036-1076
Classification Level Classification E-value
Superfamily Spectrin repeat 3.42e-17
Family Spectrin repeat 0.0016
Further Details:      
 
Domain Number 18 Region: 2341-2408
Classification Level Classification E-value
Superfamily EF-hand 0.0000000000000111
Family EF-hand modules in multidomain proteins 0.042
Further Details:      
 
Domain Number 19 Region: 1082-1175
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000000000000209
Family Spectrin repeat 0.0017
Further Details:      
 
Domain Number 20 Region: 2260-2377
Classification Level Classification E-value
Superfamily EF-hand 0.000000000000389
Family Calmodulin-like 0.013
Further Details:      
 
Domain Number 21 Region: 476-542
Classification Level Classification E-value
Superfamily Spectrin repeat 0.000036
Family Spectrin repeat 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000012949   Gene: ENSMODG00000010331   Transcript: ENSMODT00000013186
Sequence length 2409
Comment pep:novel chromosome:BROADO5:2:167510480:167634364:1 gene:ENSMODG00000010331 transcript:ENSMODT00000013186 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MKKVMESTGIKVLETAEEIQGRRREVLSRYQRFKQLVTERGQKLEDSYHYQVFRRDADDL
EKWILEKLKIASDENYKDPTNIQGKYQKHQSFEAEVQAKSRVIPELEEIRRVRFAEGHFA
HEDTKEHLEELKKLWDLLLELTKEKGTRLLQVLKLQQYLQECADILEWISDKETIVTSVE
LGEDWERAEVLHKKFEEFQVDLAAREGRVAAVNEFANQCAQEDHSQLELIKTKQDEVNTN
WQRLQGLALQRRETLSDAADLQRFNRDVAEAIQWIKEKEPLLTSEDFGKDLVSSEALFHS
HKGLERSLAVMEDKVRELCAKADKLQVSHPSDAREIQEKKEDLSSNWALIRALATKRYKK
LQASYWYQRFLSDFDELTGWMGEKTALINADELPTDVAGGEALLDRHQQHKHEIDSYEDR
FQSAAETGQYLLDADHEASEEVCEKMTALDNDHAALLELWERRRHQYEQCLDLHLFYRDS
EQVDSWMSRQEAFLENEDLGNSLGTVEALLQKHEDFEEAFGAQEEKITTLDKTATKLIDN
DHYDSENIAGIRDGLLARRDALRDRAASRRGKLKDALLLQQLYQDSDDLKNWINKKKKLA
DDEDYKDSQNLKSRVQKQQVFQEELMANEVRLNNLKKTGQEMIDGNHYASVNVTARINEV
TALWKELLETTEQKGSQLHEANQKLLFEQNVEDLARWLEEVEGQVASEDYGKGLADVQNL
LRKHGLLETSVNAHQDQVDTITDLAAYFEEVGHPDAEEMKLRQESLVSSYESLKEPMDKR
KRKLIDLLLLQQICRDTEDEEAWIQETEPSAASTYLGKDLIAAQNLLNRHQVILADIDSH
EPRIHAITERGNKLVDEGHFAAEDVASRVKSMNENMESLQARAAQRQCDLEDNVHFQQYL
ADLHEAETWIQEKEPIVDNTNYGDDEEAAGALLKKHEAFLVDLNAFGTSMKALRKQADAC
RQQAAPMEGAAQEERVIALYDFEARSPREVTMKKDDVLTLLSSINKDWWKVEADDHQGFV
PAVYVRRLARDELPRPERRRREEPSDIAQRQEQIDNQYHSLLERAEDRRRRLLQRYKEFL
LAYEAGDMLDWIREKKEENTGVELEDVHELQKKFDDFQTDLKTNEPRLQDINKVADDLRL
EDLLTPEGAEIQQELNSRWDSLQRLAEEQRLLLGSAHAVQMFHRDAEDTKERIEKKHQAL
SAADPGSDLFSVQALQRRHDAFERDLEPLGEKVTTLGETAERLIETHPDATEDLRRQQVE
LDGAWDNLLRRTEERKDDLSEAQKLYLFLNQAREILSWINSIRGPVSSVELAEDLTGTEI
LLERHQEHHDEMKAEAPTFQALEDFGIDLLSSGHRAGPEIEGKLQLVRLERDDLEKSWER
RKKMLDQCLDFQLFQGDCEQAESWMVARESSLRTDDKSSLSSLEALMKKRDDLDKAINAQ
EEKINSLKSFAERLIDDDHYAKKEIADRLQRVLDRWNALKGQMIAEREQLSDYADLKQFY
RDIEDLSDWINEMMPTACDESYKDPTNIQRKYLKHQTFENEVFGRNDEVENVIKLGNSLI
DRRACDGQEEDVKERVSRLSEHWNQLLEKTKDKGQKLNEASRQQRFNTGIRDFEFWLSEA
ETLLAMKDQARDLASAANLLKKHQLLETEMSAREDFLKDLNELATHLIDSGAFNADEIKE
KRDNINNRFRNVQDLAAAHHKKLKEAHALFQFFQDLDDEESWIKAKLLRVSSKDYGRDLP
GVQNLQRKHKRLEGELDAHEPAIQGVLETAEKLKDSDAVGREEIQERLAQLVQHWNELKE
LTKIRGLRLDESQQYLQFIENVEEEEAWINEKTALVARGDTGDILPATQSLLKKHEALEN
DFANHEIKVQEICIEGEDLLGKEDTQHKDKITAKINGLKSKIPALAKAMAAWKAQLDEDA
AFQLFNWKADTVESWIAEKESSLKTNGNGGDLAAYRMLLTKQDTLDDGLKSFEHKRLSEI
TDLKDQLVAGEHSRASTIEDRHAALLERWDQLLAAAAARRAKLLEEQLPLQKAEELFLEF
AQKASAFNNWCENAEEDLSEPVHCVSLEEIQQLQKDHEAFLVSLQGARADFDHLVELDQQ
IKALNMPSSPYTWLTVEVLEGIWLNLPNIIKEREQELQKEEERQMKNRELCQEFEQEASA
FSQWIQETRAYFLDGSLLKETGTLESQLEANKRKQKEIQVMKRQLNKIEDLGDIMEDALI
LDIKYSTIGLAQQWDQLHQLGIRMQHNLEQQIQAKDMIGVSEETLKEFSTTYQHFDETLS
GRLSHKEFRSCLRGLNYYLPMVEEGEPEPKFEKFLDDVDPGRKGYISLEEYTSFLIDKES
ENIKSSEEIENGFQALAEGKPYITKDDLKQALTPEQVQFCASRMQPYTDPRGRTAGYDYV
GFTNSYFGN
Download sequence
Identical sequences F6S9F7
ENSMODP00000012949 ENSMODP00000012949

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.