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  Home > Genomes > Monodelphis domestica 69_5 > ENSMODP00000020390

Domain assignment for ENSMODP00000020390 from Monodelphis domestica 69_5

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSMODP00000020390
Domain Number 1 Region: 868-920
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000067
Family Laminin-type module 0.0048
Further Details:      
 
Domain Number 2 Region: 336-388
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000921
Family Laminin-type module 0.049
Further Details:      
 
Domain Number 3 Region: 774-815
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000307
Family Laminin-type module 0.0069
Further Details:      
 
Domain Number 4 Region: 272-338
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000942
Family Laminin-type module 0.034
Further Details:      
 
Domain Number 5 Region: 822-870
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000977
Family Laminin-type module 0.007
Further Details:      
 
Domain Number 6 Region: 977-1028
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000103
Family Laminin-type module 0.0025
Further Details:      
 
Domain Number 7 Region: 511-552
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000335
Family Laminin-type module 0.012
Further Details:      
 
Domain Number 8 Region: 459-503
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000162
Family Laminin-type module 0.01
Further Details:      
 
Domain Number 9 Region: 929-979
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000226
Family Laminin-type module 0.051
Further Details:      
 
Domain Number 10 Region: 1085-1127
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000053
Family Laminin-type module 0.02
Further Details:      
 
Domain Number 11 Region: 1029-1082
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000446
Family Laminin-type module 0.002
Further Details:      
 
Domain Number 12 Region: 416-461
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000067
Family Laminin-type module 0.021
Further Details:      
 
Domain Number 13 Region: 1133-1180
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000109
Family Laminin-type module 0.013
Further Details:      
 
Weak hits

Sequence:  ENSMODP00000020390
Domain Number - Region: 1452-1688
Classification Level Classification E-value
Superfamily Tropomyosin 0.00317
Family Tropomyosin 0.0028
Further Details:      
 
Domain Number - Region: 1187-1308
Classification Level Classification E-value
Superfamily Spectrin repeat 0.0245
Family Spectrin repeat 0.0082
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000020390   Gene: ENSMODG00000016246   Transcript: ENSMODT00000020748
Sequence length 1787
Comment pep:novel chromosome:BROADO5:8:159833412:159928549:-1 gene:ENSMODG00000016246 transcript:ENSMODT00000020748 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
EMGLLQVHLFGFLALWGVSVQAQEPEYSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLH
KPEPYCIVSHLQEDKKCFMCNSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVE
NVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGVST
GPMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVK
LHTLGDNLLDSRIEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGHSEEVEGMVHGHCM
CRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSGSCHFDMAVYLATGNISG
GVCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNICAACTCDPAGSKNGGICDGYTDFST
GLIAGQCRCKLYTEGEKCDICKEGFYGLSADDPFGCQSCACNPLGTIPGGNPCDSETGYC
YCKRLVTGQHCDQCLQEHWGLSNDLDGCRPCDCDVGGSLNNNCSAESGQCLCRPHMIGRQ
CNEVEAGYYFTTLDHYIYEAEEAHFGPGVSIVERQYIQDRIPSWTGAGFVRVPEGAYLEF
FIDNIPYSMEYDILIRYEPQLPDHWEKAVITVQRPGKIPTSSRCGNTVPDDDNQSVSLSP
GSRYVVLPRPVCFEKGVNYTVRLELPHYTSSDSGIESPYTLIDSLVLMPYCKSLDIFTVG
GSGDGLITNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQSGLACECDPQG
SLSSVCDPNGGQCQCRPNVVGRTCDRCAPGTFGFGPSGCKPCDCHVQGSVNAFCDPVTGQ
CHCFQGIYTRQCDQCLRGYWGFPSCQPCQCNGHADDCDPISGECFGCQDYTSGHNCERCL
PGYYGDPVIGSGDHCRPCPCPDGPESGRQFANTCYQDPVTLQLVCVCNPGYLGARCNECA
SGYFGNPEDVDGVCQQCQCHNNIDTTDPEACDKRTGRCLKCLYHTEGENCQLCKYGYYGD
ALQQDCRKCVCNYLGTVQEHCDGSDCQCDKITGQCLCLPNVIGQNCDHCAPNTWNLASGT
GCEPCSCDAAHSFGPSCNEFTGQCQCMPGFGGRTCDECQELFWGDPNVKCQACDCDPRGI
EIHQCDRVTGQCVCIEGVEGPRCDKCTRGYSGIFPDCAPCHECFALWNAIIAELTNRTHK
FLEKAKALKISGVIGPYRETVDNVEKKINEIKSILAQSPAAEPLKNIGNLFEEAEKLTKD
VTEKMSEVEAKLSDAASKSNSTVEELDSLQMDAQSLDKTVKELAEQLEFIKNSDIRGALD
SITKYFQISLEAEERVNASTTDPNSIVEQSAFTRNKVEELMMERETQFREKQEEQSRLLD
ELAGKLQSLDLSAAAEQTCGTPPGASCAETPCGGPSCRTDDGEKKCGGPGCDGLVTVAHN
AWQKAMDFDRDVLSALAEVEQLSKTVSEAKLRADEAKQSAQAVLLKTNATKEKVDKSNED
LRNLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEV
ILQQSAGDIARAEMLLDEAKRASKSATDIKVTTDMVKEALEEAEKAQIAAEKAIKQADED
IQGTQNLLTSIESETAASEETLYNASQRISELERNVEELKRKAAQNAGEAEYIGQVVDTV
KQSADHVKKVLDSELSGKYKRVENLIAKKTEESVDARKKAEMLQNEAKMLLAQANSKLQL
LKDLEQKYEDNQKYLEDKAQELVKLEEEVRLLLQDISQKVAVYSTCL
Download sequence
Identical sequences F7A5M5
ENSMODP00000020390 ENSMODP00000020390 13616.ENSMODP00000020390

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.