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  Home > Genomes > Monodelphis domestica 69_5 > ENSMODP00000024825

Domain assignment for ENSMODP00000024825 from Monodelphis domestica 69_5

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSMODP00000024825
Domain Number 1 Region: 449-705
Classification Level Classification E-value
Superfamily YWTD domain 4.97e-61
Family YWTD domain 0.000000835
Further Details:      
 
Domain Number 2 Region: 1363-1620
Classification Level Classification E-value
Superfamily YWTD domain 4.58e-56
Family YWTD domain 0.0000033
Further Details:      
 
Domain Number 3 Region: 751-1006
Classification Level Classification E-value
Superfamily YWTD domain 4.45e-55
Family YWTD domain 0.00000141
Further Details:      
 
Domain Number 4 Region: 1058-1314
Classification Level Classification E-value
Superfamily YWTD domain 3.14e-48
Family YWTD domain 0.00000329
Further Details:      
 
Domain Number 5 Region: 272-312
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000288
Family LDL receptor-like module 0.00064
Further Details:      
 
Domain Number 6 Region: 236-274
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000017
Family LDL receptor-like module 0.00082
Further Details:      
 
Domain Number 7 Region: 317-353
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000183
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 8 Region: 151-191
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000236
Family LDL receptor-like module 0.00059
Further Details:      
 
Domain Number 9 Region: 74-113
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000353
Family LDL receptor-like module 0.00078
Further Details:      
 
Domain Number 10 Region: 1318-1362
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000317
Family EGF-type module 0.0082
Further Details:      
 
Domain Number 11 Region: 195-233
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000445
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 12 Region: 112-150
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000458
Family LDL receptor-like module 0.00081
Further Details:      
 
Domain Number 13 Region: 366-409
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000134
Family EGF-type module 0.014
Further Details:      
 
Domain Number 14 Region: 708-744,1002-1052
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000832
Family Growth factor receptor domain 0.018
Further Details:      
 
Domain Number 15 Region: 395-442
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000391
Family EGF-type module 0.0048
Further Details:      
 
Domain Number 16 Region: 34-76
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000157
Family LDL receptor-like module 0.001
Further Details:      
 
Weak hits

Sequence:  ENSMODP00000024825
Domain Number - Region: 1620-1657
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000998
Family EGF-type module 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000024825   Gene: ENSMODG00000019898   Transcript: ENSMODT00000025266
Sequence length 1904
Comment pep:novel chromosome:BROADO5:5:283767126:283934169:-1 gene:ENSMODG00000019898 transcript:ENSMODT00000025266 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MRRPGGSLLLLLLLLLRLGALLGAHGLASSPECACGRSHFTCAVSALGECTCIPAQWQCD
GDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEE
DEFPCQNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSEKEFRCSDGSCIAEHWYCDGDTD
CKDGSDEESCPSAVPAPPCSLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCR
SGEFMCDSGLCINAGWRCDGDADCDDQSDERNCTTSMCTAEQFRCKSGRCVRLSWRCDGE
DDCSDNSDEENCENTGSPQCASDQFLCGNGRCIGQRKLCNGVNDCGDSSDESPQQNCRPR
TGQENCNVNNGGCAQKCQMVRGAVQCTCHTGYRLMEDGRSCQDVNECEEEGYCSQGCTNS
DGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIA
LDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWLHDKLYWTDSGT
SRIEVANLDGAHRKVLLWQNLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII
ADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGSNRKAVISQGLPHPFAITVFEDS
LYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGRNRCGNNNGGCTHL
CLPSGQNYTCACPTGFRKTSSHSCAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADV
RSAVALDWDSRDDYVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYW
TDAGTDRIEVANTDGTMRTVLIWENLDRPRDIVVEPRGGFMYWTDWGASPKIERAGMDAS
GRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLIGTQLPHPFGLT
LYGERIYWTDWQTKSIQSADRLTGLDRETLQENLENLMDIHVFHRLRPPVHTPCAVENGG
CSHLCLRSPHPKGYSCTCPTGINLLADGKTCSSGMRSFLIFARRIDIRMVSLDIPYFADV
VVPVNITMKNTIAIGVDPQEGKVYWSDSTLRKISRANLDGSHHEDIITTGLQTTDGLAVD
AIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGSMYWTDWGENAKL
ERAGMDGSDRAVLINNNLGWPNGLTVDKAGSQLLWADAHTERIEAADLNGANRRTLVSPV
QHPYGLTLLDSYIYWTDWQTRSIHRADKGTGSNVILVRANLPGLMDIQAVDRQRPLGSNK
CGPKNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCDPSPETYLLFSSRGSIRRISLDTS
DHTDVHVPVPELNNVISLDYDSVDGKVYYTDVFLDVIRRADLNGSNMETVIGRGLKTTDG
LAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAAFPRKGYLFWTDWGH
LAKIERSNLDGSERKLLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVL
VSHVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLMDIIVVSPQRQT
GTNACGVNNGGCTHLCFARALDFVCACPDEPDDRPCSLVPGLVPPAPKSTSTSEKSPGPL
NTPSTTSRSSTARTHTSLEESEGNCSEKDGRQGLCAHSNEAVPAAPGEGLHVSYMIGGLL
SILLILVLIAALVLYRHKKFKFTDPGLGNLTYSNPSYRTSTQEVKIETIPKPAMYNQLCY
KKEAGPEHNYTKEKIKIVEGICLLSGGGAMDQTQPVPQGPPSLSLCWSSTRASSRPPPKL
ACTEHIVCDFDPGGGPAQVLLHDGEADFLHDFGQIFFGGGPGLL
Download sequence
Identical sequences F6W5S4
ENSMODP00000024825 ENSMODP00000024825

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.