SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000029894 from Monodelphis domestica 69_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000029894
Domain Number 1 Region: 560-617
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.64e-25
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 2 Region: 392-449
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.92e-24
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 
Domain Number 3 Region: 336-393
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.14e-24
Family Classic zinc finger, C2H2 0.0053
Further Details:      
 
Domain Number 4 Region: 280-337
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.75e-24
Family Classic zinc finger, C2H2 0.0031
Further Details:      
 
Domain Number 5 Region: 50-110
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.2e-21
Family KRAB domain (Kruppel-associated box) 0.001
Further Details:      
 
Domain Number 6 Region: 448-505
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.91e-21
Family Classic zinc finger, C2H2 0.0071
Further Details:      
 
Domain Number 7 Region: 602-654
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.09e-21
Family Classic zinc finger, C2H2 0.0035
Further Details:      
 
Domain Number 8 Region: 504-561
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.59e-20
Family Classic zinc finger, C2H2 0.0091
Further Details:      
 
Domain Number 9 Region: 224-281
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.88e-17
Family Classic zinc finger, C2H2 0.01
Further Details:      
 
Domain Number 10 Region: 177-225
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000000000115
Family Classic zinc finger, C2H2 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000029894   Gene: ENSMODG00000023447   Transcript: ENSMODT00000031463
Sequence length 663
Comment pep:novel chromosome:BROADO5:3:523012164:523060910:1 gene:ENSMODG00000023447 transcript:ENSMODT00000031463 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEDNPRRCSWPESRPEKMEELHQMDSLGLLCCLYRDPGAAGMAFERDRLPAQEVVTFKDV
AVEFTQEEWCLLSPPQKELYKEVMLENVQNLHSVGLPAPPEDMTSYMEQRESSWMLEQEV
LRSCCPEGKIIPEIKAYPIEMSLPVDEMDLQRFVSDGPDNFSFNEIFVPPPNLSNIEYQR
MHTEEKSTESNQRGKTFKYRSNLTFHQRIHTGEKLYECMKCGKTFCQNSHLAVQQKMHVE
EKPYECKQFGKTFSKTNSLAEHQRRHTLEKPYLCMQCGKTFSRSDMLAVHQRIHTGEKPY
ECKQCGKTFSRSDMLAIHQRIHTGEKPYECMQCRKTFSRRHHLAVHQRMHTGEKPYECKQ
CGKTFSQTSSLAVHQRMHTGEKPYECKKCGKTFSQTSSLAGHQRMHTGEKPYECMQCGKT
FTCSSHLVVHQRIHTGEKPYDCKQCGKTFTCSSHLAGHQRMHTGEKPYKCMQCGKTFSRR
HHLAVHQKMHIGGKPYECMQCGKTFSQRGQLDGHQRMHTREKLYECKQCGKTFSRRGQLA
GHQRMHNREKPYECMQCGKTFRQTSSLAVHQRIHTGEKPYECMQCGKTFSRRGQLAVHQR
IHTGEKPYQCKQCGKTFSRSDNLAVHQRIHTGEKPYECMQCGNTFSWRGQLTIHQRMHTG
EKP
Download sequence
Identical sequences F6VNI2
ENSMODP00000029894 ENSMODP00000029894

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]