SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000033277 from Monodelphis domestica 69_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000033277
Domain Number 1 Region: 367-423
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.87e-21
Family Classic zinc finger, C2H2 0.0083
Further Details:      
 
Domain Number 2 Region: 6-67
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 7.19e-21
Family KRAB domain (Kruppel-associated box) 0.0017
Further Details:      
 
Domain Number 3 Region: 590-647
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.05e-20
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 4 Region: 478-535
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.69e-20
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 5 Region: 422-479
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.71e-20
Family Classic zinc finger, C2H2 0.0057
Further Details:      
 
Domain Number 6 Region: 253-310
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.7e-19
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 7 Region: 534-591
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.19e-18
Family Classic zinc finger, C2H2 0.0075
Further Details:      
 
Domain Number 8 Region: 646-703
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.09e-18
Family Classic zinc finger, C2H2 0.0075
Further Details:      
 
Domain Number 9 Region: 310-366
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.74e-17
Family Classic zinc finger, C2H2 0.009
Further Details:      
 
Domain Number 10 Region: 692-744
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.35e-17
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 11 Region: 188-239
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000198
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Weak hits

Sequence:  ENSMODP00000033277
Domain Number - Region: 109-134
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00717
Family Classic zinc finger, C2H2 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000033277   Gene: ENSMODG00000010532   Transcript: ENSMODT00000034854
Sequence length 749
Comment pep:novel chromosome:BROADO5:6:274904415:274977903:1 gene:ENSMODG00000010532 transcript:ENSMODT00000034854 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAPGAPARVSVTFDDVTIYFTEQEWKSLNEWQKELYKHVVKTNYETLVSLGCAISKPNLI
TWIEQGEEPFIRDQGNFGTRDLTIGIKTDEHLDLKFTKMQLLCGKKGCECDKAFPKQSKL
TDHFKVHTKKQHYRALLFGLMDLDWDKRSVTKGDMLRFSSSSFHDGLSWSLEGHGHDLQK
QNWYRPLPFRCNACSRGFTHKSQLANHIRVHRPKKHFQCTECDKNFAQKSRLFRHQCLHT
GERPFQCPKCDKSFHQKGHLLKHLPLHTGERPFHCPDCDKSFRVKGDLKAHQRRHREEKP
FSCSECGKGFTTHHYLMDHIRIHTGERPFQCPDECNKGFTHKSQLANHIRVHREKKPFFC
TECNKNYGRKDRLLRHQRLHTGERPFQCPECDKSFHQKGHLLRHLPIHTGERPFQCPECD
KSFRVKADMKAHQRRHSGERPFSCSECGKGFTKHCHLTEHIRLHTGERPFQCPECDKTFR
LKADMKAHQYTHSGEWPFSCSECGKGFTRQFHLTEHLRMHTGEKPFRCPQCDKSFRVKGS
LKVHQCVHSRDRPFSCKECGKGFTQQYKLTEHFRVHSGEKPFQCPECDTSFRLKSGLNNH
QRLHHKERPFSCSECGKGFTRQFHLTEHLRMHTGEKPFRCPQCDKSFRLKGALRVHQCVH
SRDRPFSCEECGKGFTHQYKLTEHFRVHSGEKPFQCPECDTSFRLKSGLNNHQRLHHKER
PFSCSECGKGFIHKSRLTTHIRVHTRDKP
Download sequence
Identical sequences F6XH11
ENSMODP00000033277 ENSMODP00000033277

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]