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Domain assignment for ENSMODP00000040497 from Monodelphis domestica 69_5

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSMODP00000040497
Domain Number 1 Region: 429-588
Classification Level Classification E-value
Superfamily Ribonuclease H-like 3.54e-40
Family Retroviral integrase, catalytic domain 0.0014
Further Details:      
 
Domain Number 2 Region: 169-311
Classification Level Classification E-value
Superfamily Ribonuclease H-like 6.45e-25
Family Ribonuclease H 0.0034
Further Details:      
 
Domain Number 3 Region: 2-115
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.37e-18
Family Reverse transcriptase 0.0000469
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000040497   Gene: ENSMODG00000028191   Transcript: ENSMODT00000043604
Sequence length 700
Comment pep:novel chromosome:BROADO5:4:27163850:27166568:-1 gene:ENSMODG00000028191 transcript:ENSMODT00000043604 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSAPALGIPDYNKPFTLYVHERRGVASGVLTQTLGPSQRPIAYYSAQLDPVAAGAPPCLR
GVAATALLVTKTVDLVLGCPLTIMCPHEIEALLVKHRTQAFSDQRITRYEITLLNSENIT
LKRCSTLNPATLLPDLPTSGEPLHNCETLVSMAEKPRDNLLDTPLENADLILFTDGSSFM
RDGIRYTGAAVVSEFATEWSASLPSNISAQGAELICSKQACIIAKDKKATIYTDSRYAFG
ICHSVGMLWLQRGFLTSAGKSIANAEIINEVLSALKLPKALAVVHCSAHTGGSDPVSRGN
DRADAAAKLAAIEGPGLILTLTTTDNLNLSLSYNEKEVEKWKQKFKAKQINGVWVSPEGK
PLLPRSFYNQICQSIHKNGHFGTQGIVDSVKRVWIAPGITTVASKVCSACPICQAYNQHA
YRGKAFGGRPLAYTPFEHLQIDFITMPKAGRYKFCLVIVDQLTRWPEAFPTTRATADFVA
KILLKEIIPRFGLPARIDSDRGSHFTDSVLNQIYSCLGITPKFHVPYHPQSSGQVERMNK
ELKTMIGKLCTETHLKWPEILPLALFYLRSRPRGDLHISPFEMLFGHPPIQAKPFSPAYT
SLLGGDITIASYIQELQHKLRELHESGAAVQAGPLDFSLHDLNPGDKVYIKNFKRTGATE
PSWEGPFQILLTTPTSIKIGERDSWIHCSHVKKASSAETD
Download sequence
Identical sequences K7E3Z5
ENSMODP00000040497 ENSMODP00000040497

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