SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSMODP00000040535 from Monodelphis domestica 69_5

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSMODP00000040535
Domain Number 1 Region: 2-151
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 5.66e-17
Family RNA-dependent RNA-polymerase 0.047
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000040535   Gene: ENSMODG00000028804   Transcript: ENSMODT00000043640
Sequence length 316
Comment pep:novel chromosome:BROADO5:5:76366571:76367584:1 gene:ENSMODG00000028804 transcript:ENSMODT00000043640 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MIISIDAEKAFDKIQHPFLLKTLESIGIEGSFLKIINSIYLKPTANIICNGDKLDAFPIR
SGVKQGCPLSPLLFDIVLETLAVAIREDKEIEGIRIGKEETKLSLFADDMMVYLKNPRES
TKKLIEIINNFSKVAGYKINPHKSSAFLYISNTAQQQELEREIPFKITLDKIKYLGIYLP
RQTQELYEHNYKTLATQLKLDLNNWKNINCSWIGRANIIKMTILPKLIYLFSAIPIELPK
YFFTDLEKTITKFIWKNKRSRISREIMKKNTYDGGLAVPDLKLYYKAAVIKTIWYWLRNR
KEDQWNRLGENDLSKT
Download sequence
Identical sequences K7E433
ENSMODP00000040535 ENSMODP00000040535

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]