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  Home > Genomes > Monodelphis domestica 69_5 > ENSMODP00000005736

Domain assignment for ENSMODP00000005736 from Monodelphis domestica 69_5

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSMODP00000005736
Domain Number 1 Region: 924-981
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.97e-26
Family Classic zinc finger, C2H2 0.0038
Further Details:      
 
Domain Number 2 Region: 756-813
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.8e-26
Family Classic zinc finger, C2H2 0.0044
Further Details:      
 
Domain Number 3 Region: 420-477
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.23e-25
Family Classic zinc finger, C2H2 0.0036
Further Details:      
 
Domain Number 4 Region: 140-197
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.35e-25
Family Classic zinc finger, C2H2 0.0043
Further Details:      
 
Domain Number 5 Region: 364-421
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.36e-25
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 6 Region: 868-925
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.12e-25
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 7 Region: 308-365
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.34e-24
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 8 Region: 196-253
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.05e-24
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 9 Region: 476-533
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.15e-24
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 10 Region: 644-701
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.55e-24
Family Classic zinc finger, C2H2 0.0034
Further Details:      
 
Domain Number 11 Region: 588-645
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.16e-23
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 12 Region: 700-757
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.51e-23
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 
Domain Number 13 Region: 812-869
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 9.84e-23
Family Classic zinc finger, C2H2 0.0044
Further Details:      
 
Domain Number 14 Region: 252-309
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.2e-22
Family Classic zinc finger, C2H2 0.0067
Further Details:      
 
Domain Number 15 Region: 532-589
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.82e-21
Family Classic zinc finger, C2H2 0.007
Further Details:      
 
Domain Number 16 Region: 2-59
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.96e-20
Family KRAB domain (Kruppel-associated box) 0.0012
Further Details:      
 
Domain Number 17 Region: 90-141
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.03e-19
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 18 Region: 966-1018
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.09e-19
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000005736   Gene: ENSMODG00000023654   Transcript: ENSMODT00000005857
Sequence length 1021
Comment pep:novel chromosome:BROADO5:3:501402894:501441767:1 gene:ENSMODG00000023654 transcript:ENSMODT00000005857 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
LQEVVTFKDVAVDFTREEWCLLSPPQKGLYKEVMLENTRNLLSVGLLALPEKVISYLEQM
DRFSLARRRMTISYDPESREEKKAAELDESLSEHRKIHTAKKPYECKQCGKAFSRNAHLV
VHQRTHTGEKPYECVQCGKAYSRNSQLAAHQRTHTGEKPYECVQCGKAFSMSSYLAIHQK
IHTGEKPYECKQCGKAFTQSSTLYQHHRIHTGETPYKCKQCGKAFIWKSYLSVHQRIHTG
ETPYQCKQCGKTFNWKSCLTVHERIHTGEKSIECKVCGQTFAMRSYLVVHRRVHTGEKPF
KCNQCGKAFSMSSSLGKHQRIHTGEKPYECKQCGKAFSVSSSLVVHKRMHTGEKPYECVH
CGKAFRINSSLVKHLRTHTGEKPYECKQCGKAFSMSSSLVKHQRTHTGEKPYKCQQCGRA
FSISSSLVLHQRIHTGEKPYECKECGKTFSRSSSVFLHRRIHTGEKPYECKQCGKAFSVS
SSLVLHQRIHTGEKPYECMECGKTFIVSSNLAVHQKIHTREKYYECKQCGKTFMYRASLS
GQQNFHTGIFPYECKQCGKPFSQNSNLVVHQRIHTGEKPYKCKQCGKAFSVSSTLVKHQR
IHTGEKPYKCKHCGKAFSVLFTLVNHQRIHSGEKLYHCKQCGKTFSQSSSLVVHQRIHTG
EKPHGCLECGKTFSRISLLTRHQIIHTGEKLYECKQCGKTFFHTSSLSRHQIIHTGEKLY
ECKQCGKTFFHTSSLSRHQRIHTGEKPYECKHCGKTFSQSSSLVEHQRIHTGEKPYECKH
CGKAFSQNSRLAVHQRIHTGEKPYECKHCGKAFSQNSRLAVHQRIHTGEKPYECKKCGET
FSQNSNLVLHQRIHTGKKLPECKQCGKTFSQNSNLVLHQRIHTGEKPYKCKQCGKAFSVN
FTLVNHQRIHTGEKPYECKQCRKTFSTNSHLAEHQRIHTGEKPYECKQCGKRFTQNSSLV
VHQRIHTGEKPYECKQCGKRFTQNSSLVVHQRIHTVKVPYECKSCGKTFIRSSQLVLHHK
I
Download sequence
Identical sequences F6UMW3
13616.ENSMODP00000005736 ENSMODP00000005736 ENSMODP00000005736

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.