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  Home > Genomes > Monodelphis domestica 69_5 > ENSMODP00000017659

Domain assignment for ENSMODP00000017659 from Monodelphis domestica 69_5

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSMODP00000017659
Domain Number 1 Region: 677-734
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5e-26
Family Classic zinc finger, C2H2 0.0039
Further Details:      
 
Domain Number 2 Region: 397-454
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.04e-26
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 3 Region: 229-286
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.39e-25
Family Classic zinc finger, C2H2 0.0058
Further Details:      
 
Domain Number 4 Region: 453-510
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.56e-25
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 5 Region: 285-342
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.54e-25
Family Classic zinc finger, C2H2 0.0055
Further Details:      
 
Domain Number 6 Region: 565-622
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.9e-25
Family Classic zinc finger, C2H2 0.0062
Further Details:      
 
Domain Number 7 Region: 341-398
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 7.28e-25
Family Classic zinc finger, C2H2 0.0064
Further Details:      
 
Domain Number 8 Region: 621-678
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.31e-24
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 9 Region: 173-230
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.54e-24
Family Classic zinc finger, C2H2 0.0095
Further Details:      
 
Domain Number 10 Region: 509-566
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.93e-24
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 11 Region: 733-790
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.09e-24
Family Classic zinc finger, C2H2 0.0054
Further Details:      
 
Domain Number 12 Region: 118-174
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.33e-24
Family Classic zinc finger, C2H2 0.0068
Further Details:      
 
Domain Number 13 Region: 789-846
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.32e-22
Family Classic zinc finger, C2H2 0.0076
Further Details:      
 
Domain Number 14 Region: 835-887
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.41e-20
Family Classic zinc finger, C2H2 0.005
Further Details:      
 
Domain Number 15 Region: 2-58
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.44e-20
Family KRAB domain (Kruppel-associated box) 0.001
Further Details:      
 
Domain Number 16 Region: 79-130
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.87e-18
Family Classic zinc finger, C2H2 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000017659   Gene: ENSMODG00000014123   Transcript: ENSMODT00000017987
Sequence length 889
Comment pep:novel chromosome:BROADO5:1:551932129:551943179:1 gene:ENSMODG00000014123 transcript:ENSMODT00000017987 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
EAVTFKDVTVDFTQEEWCLLSPPQKELYKEVMLENAQNLISVGLPAPSEEVISYLEQRET
PWMLEQEDLRSFYPGEGGKHYECKQCGKIFPSNSNLVVHQRIHTGDNPYECKPCGKKFSQ
RSHLAIHQRIYTGNKPYECKQCGKVFTTNSSLAVHQRIHTGERPYECKQCGKTFSQNSNL
AVHQRIHTDERPYKCKQCGKTFSQRPYLAVHQKIHTRDKPYECKQCGKTFSRTSNLAVHQ
RIHTGERPYECKQCGKTFTDKSNLAVHQRIHTGNKPFECKQCGKTFSQTSHLAVHQRIHT
GERPYKCKQCGNTFSQRSYLAVHQRIHTGERPYECKQCGKTFSRSSNLAVHQRIHTGERP
YECMQCGKTFPSNSNLAVHQKIHTEERPYKCKQCGKTFSQRSYLAVHQRTHTGDKPYECK
QCGKTFSRSSNLTVHQKIHTGERPYKCKQCGKTFSQKSYLAVHQRIHTGDKPYECKQCGK
TFIWRSHLAVHQRIHTGNKPYECKQCGKVFTANSNHAVHQRIHTGERPYECKQCGKTFSR
RSHLAVHQRIHTGNKPYECKQCGKAFSQRSHLAVHQRIHTGNKPYECKQCGKVFTANSSL
AVHQRIHTGDKPYECKQCGKTFPSNSNLAVHQRIHTGERPYECKQCGKTFSQTSHLAVHQ
RIHTGERPYKCKQCGNTFSQRSYLAVHQRIHTGERPYECKQCGKTFSRSSNLAVHQRIHT
GERPYECMQCGKTFPSNSNLAVHQRIHTEERPYECKQCGKTFGRRSHLAVHQRIHTGERP
YECKQCEKTFSRRSHLAVHQRIHTWKKLYDCKQCGKAFNQRSHLAVHQRIHTGNKPYECK
RCGKVFMANSNLAVHQRIHTGERPYECKECGKTFSWRSYLAVHQRIHTV
Download sequence
Identical sequences F6Y3S2
ENSMODP00000017659 ENSMODP00000017659

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.