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  Home > Genomes > Monodelphis domestica 69_5 > ENSMODP00000028072

Domain assignment for ENSMODP00000028072 from Monodelphis domestica 69_5

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSMODP00000028072
Domain Number 1 Region: 205-262
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.83e-26
Family Classic zinc finger, C2H2 0.0049
Further Details:      
 
Domain Number 2 Region: 934-991
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.17e-25
Family Classic zinc finger, C2H2 0.0034
Further Details:      
 
Domain Number 3 Region: 485-542
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.27e-25
Family Classic zinc finger, C2H2 0.0059
Further Details:      
 
Domain Number 4 Region: 878-935
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.42e-25
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 5 Region: 261-318
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.45e-25
Family Classic zinc finger, C2H2 0.0041
Further Details:      
 
Domain Number 6 Region: 373-430
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.57e-25
Family Classic zinc finger, C2H2 0.0035
Further Details:      
 
Domain Number 7 Region: 654-711
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.67e-25
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 8 Region: 990-1047
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.92e-25
Family Classic zinc finger, C2H2 0.0038
Further Details:      
 
Domain Number 9 Region: 149-206
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.23e-25
Family Classic zinc finger, C2H2 0.0038
Further Details:      
 
Domain Number 10 Region: 710-767
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.17e-24
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 11 Region: 541-598
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.34e-24
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 12 Region: 822-879
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.19e-24
Family Classic zinc finger, C2H2 0.0048
Further Details:      
 
Domain Number 13 Region: 429-486
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 2.52e-24
Family Classic zinc finger, C2H2 0.0052
Further Details:      
 
Domain Number 14 Region: 1046-1103
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.84e-24
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 15 Region: 317-374
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.11e-23
Family Classic zinc finger, C2H2 0.0046
Further Details:      
 
Domain Number 16 Region: 766-823
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 1.12e-23
Family Classic zinc finger, C2H2 0.006
Further Details:      
 
Domain Number 17 Region: 597-655
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 5.95e-23
Family Classic zinc finger, C2H2 0.0047
Further Details:      
 
Domain Number 18 Region: 1088-1140
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.94e-22
Family Classic zinc finger, C2H2 0.0042
Further Details:      
 
Domain Number 19 Region: 94-150
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 8.22e-21
Family Classic zinc finger, C2H2 0.0095
Further Details:      
 
Domain Number 20 Region: 1-51
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 1.15e-18
Family KRAB domain (Kruppel-associated box) 0.001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSMODP00000028072   Gene: ENSMODG00000023056   Transcript: ENSMODT00000029650
Sequence length 1145
Comment pep:novel chromosome:BROADO5:1:713340479:713388331:1 gene:ENSMODG00000023056 transcript:ENSMODT00000029650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
VTFKDVAVDFTQEEWRLLSPPQKELYKEVMLENAQNLLSVGKESSPPEVVLSYLEQSEAP
WMLEEEGLRTYCPGKGREKWYPESHSDDPERKDFRRSFELAVHHRVHTGEKSYECKQCGQ
TFRQNFELAVHQRIHTGGKPYKCNQCGKTFTNNSSLAVHHRVHTGEKPYDCKQCGKAFSR
RSDLAIHLRIHTGEKPYECNQCGKTFTNSSSLAVHQRVHTGEKPYECNECGKTFSHRSHF
AIHQRVHTGEKPYECNQCGKTFTNSSSLAVHQRVHTGEKPYECKQCGKAFSQSYKLAVHQ
RVHTGEKPYECKQCGKAFIQSYKLAVHQRIHTGEKPYECKQCGKTFRRSFELAVHHRVHT
GEKPYECKQCGKTFRQNFELAVHQRIHTGERPYKCKECGKAFSRSSRLFVHQRIHTGEKP
YECNECGKTFANTSSLAVHHRVHTGEKPYECNQCGKTFRQSSNLAVHHRVHTGEKPYECK
QCGKAFSQRSRLAVHQRIHTGEKPYECNQCGKTFRQNSKLVAHQKIHTEEKPYECNECGK
TFTNNSSLAVHHIIHTGEKPYECKQCGKTFTNNSSLAVHQRIHTGEKPYECKQCGKTFRL
SCELTTHQRVHTGEKPYECKQCGKAFSQRSHLAVHHRRIHTGMKPYDCNQCGKTFTNNSS
LAVHQRVHTGEKPYECNQCGKTFTYNFNLAVHQRIHTGEKPYDCKQCGKTFRRSFELAIH
QRIHTGEKPYECKECGKAFNQSSSLTLHQRIHNGKKPYECKECGKTFSQNSHLTVHWRIH
TGEKPFECKQCRKTFRRSFELAIHQRTHTGEKPYECKQCGKTFRRSFYLAVHHRVHTGEK
PYECNECGKTFSNNSSLTVHQKIHTGEKPYECNQCGKTYTYNSNLVVHQRVHTGEKPYEC
NQCGKTFTYNSNLAVHHRVHTGEKPYECNQCGKTFTYNSSLAVHQRVHTGEKPYECKQCG
KTFSRSSKLALHQRVHTGEKPYECKECGKTFNQSSSLTLHQRIHNGKKPYECKECGKTFS
QNSHLTVHQRIHTGEKPFECKQCGKTFRRSFELAIHQRIHTGEKPYECKQCGKTFRRSFY
LAVHHRVHTGEKPYECNECGKTFSNNSSLAVHQKIHTGEKPYECNQCGKTFTYNSNLAVH
QRVHT
Download sequence
Identical sequences F7C8V3
ENSMODP00000028072 ENSMODP00000028072

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.